Gene Rcas_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3055 
Symbol 
ID5540551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3958427 
End bp3959203 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content65% 
IMG OID640895174 
Productmethyltransferase type 11 
Protein accessionYP_001433127 
Protein GI156742998 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000014304 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.795222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGT TGCTCGACAG GCGGGCGAGA GGCATGGAGC GCACGGAATA CGAGGTGATG 
GCGGCTGTCG AGAGCCGTCA CTGGTGGTAC GGCGGCATGC GCGCGATTGC GGCGGCGCTG
CTCGATGAGG TCTATGCCGG GCGGCGCGAT CTGCGCATTC TCGACGCCGG TTGCGGCACC
GGTGGGAACG TCGTCTTTCT ACGGCGGTAC GGGTCGGTCG CGGCGGTCGA TCTGGCGCCG
GAAGCGGCGC TTTTCGGCGC TGAGCGACTG CGCGGCGCGT TGGTGCGGGC AAGTGTGCTG
GCATTGCCAT TTGTCGATGA ATGGTTCGAT CTGGTCACAT CGTTCGAGGT GTTGTACCAT
CGGGATGTTC CCGATGAAAC CGTTGCACTG CGTGAGACGT GGCGCGTGCT CCGTCCCGGC
GGACGGTTGT TACTGCGCCT CCCCGCCTTC GAGTGGCTGC GCGGCAGGCA CGATTGCGCC
GTCCACGGAC GGCGCCGCTA CACTGCGAAC GAGGTGCGCG AGTTGCTTCA GCCACAGGGA
TTCGAGGTCG AACGCATATC GTATGTCAAC ACCCTGCTCC TGCCGCTCCC ACTGACTCAG
CGGTTCATTG AGCGCGTGGC GCCTGCCATT GATCGCAACG GCTCGGATCT TCAATTGCCG
CCAGCGATGC TGAACGAAGC GTTGCGCTGG CCCCTTGCCG CCGAAGCCGC CTGGATCGCG
CGCGGCGGAT CGTTTCCGGT GGGTCTCTCG GTGATCTGTC GGGCGCGGAG GGTGTGA
 
Protein sequence
MLTLLDRRAR GMERTEYEVM AAVESRHWWY GGMRAIAAAL LDEVYAGRRD LRILDAGCGT 
GGNVVFLRRY GSVAAVDLAP EAALFGAERL RGALVRASVL ALPFVDEWFD LVTSFEVLYH
RDVPDETVAL RETWRVLRPG GRLLLRLPAF EWLRGRHDCA VHGRRRYTAN EVRELLQPQG
FEVERISYVN TLLLPLPLTQ RFIERVAPAI DRNGSDLQLP PAMLNEALRW PLAAEAAWIA
RGGSFPVGLS VICRARRV