| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3053 |
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| Symbol | ruvB |
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| ID | 5540549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3956680 |
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| End bp | 3957723 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895172 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_001433125 |
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| Protein GI | 156742996 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00505613 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG AACGAGTCGT CACCCCCAGG GCAGGCGAAG AAGACCAACA GATCGAGAAA
AGTCTGCGCC CACGCCGTCT TGCCGAGTTC ATCGGACAGG AGAAGGTCGT TGAGCAGTTG
CGCATTGCGA TTGCCGCCGC CAAAGGGCGT GGCGAACCGC TCGATCATAC GTTGCTCTAT
GGTCCGCCCG GGTTGGGGAA GACGAGTCTG GCAGGCGTGC TCGCCAACGA AATGGAGGTC
AATATCAAAC TGACGTCGGG TCCCGCCATC GAGCGCGCCG GCGACCTTGC TGCACTGCTG
ACCAATCTCC AGAAAGACGA TATTCTGTTC ATCGACGAGA TCCATCGCCT GAATCGAGCT
ATCGAAGAAG TGCTCTACCC GGCGATGGAA GATTTCGCGC TCGATATTAT GGTCGGGAAG
GGACCAGGAG CGCGCAGCCT GCGCCTGAAA CTGCCGCGCT TCACGGTGGT CGGCGCGACT
ACGCGCCTGG CGTTGCTTAC GTCGCCGCTG CGCGACCGCT TTGGGTCGGT ACACCGACTC
GAATTCTACT CGGTCGATGC GCTCTACGAG ATCGTGATGC GTTCGGCGCG TATTTTGGGG
GTGGTATGCA CGCCAGAAGG AGCGCGCGAA ATAGCAGCGC GGGCGCGCGG CACGCCGCGC
ATCGTCAATC GGCTGCTGCG CCGCGTGCGC GATTATGCCC AGGTCATCGG CGATGGCATC
ATCACGCTCG ACGTGGCGCG CGATGCGCTG GCGAAACTGG AAGTCGATCA CCTGGGACTC
GATGAAAACG ACCGACGGTT GCTGCGCGCT ATCATCGACC TGTTCGGCGG GGGACCGGTC
GGGCTTTCGA CACTGGCTGC ATCGCTTGCC GAAGAAGTCG ATGCCATTGA GGACGTGTAC
GAGCCGTTTC TGCTGCAACT CGGGTTTTTG CAGCGCACGC CGCGCGGACG GATTGCCACG
CGACGCGCTT ATGAGCATCT CGGCGTTCCC TATGTCGAGC GCAGTGTTGA TAACGGCGCT
GAACAGGGAC GCCTGTGGAC GTGA
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| Protein sequence | MSDERVVTPR AGEEDQQIEK SLRPRRLAEF IGQEKVVEQL RIAIAAAKGR GEPLDHTLLY
GPPGLGKTSL AGVLANEMEV NIKLTSGPAI ERAGDLAALL TNLQKDDILF IDEIHRLNRA
IEEVLYPAME DFALDIMVGK GPGARSLRLK LPRFTVVGAT TRLALLTSPL RDRFGSVHRL
EFYSVDALYE IVMRSARILG VVCTPEGARE IAARARGTPR IVNRLLRRVR DYAQVIGDGI
ITLDVARDAL AKLEVDHLGL DENDRRLLRA IIDLFGGGPV GLSTLAASLA EEVDAIEDVY
EPFLLQLGFL QRTPRGRIAT RRAYEHLGVP YVERSVDNGA EQGRLWT
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