Gene Rcas_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3045 
Symbol 
ID5540541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3948008 
End bp3948616 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content56% 
IMG OID640895164 
Producthypothetical protein 
Protein accessionYP_001433117 
Protein GI156742988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGTTC AAGGCGTCTC AATCGGCGAA ATGCTCAACC AGAGCATTCA GGTGTTGACG 
AAGCCGAGCG TCGAAACATT CGAGCGCTTC GAGCGGCATG GTGGTCAGCG CGAGGCAACG
ATCTATATCA TGGTGGCGGC GGCGATCAGT GCGGCGGTTT CGCTGGTCTT TGGTCTGTTG
GGTGGTATCG TCTCGGCGTT GCTTGCCGGC GTTTTGGGTT TCATCCTTCC GGTTGTGGGT
TTCTATCTCT TCGCCTTTCT GGTCTATTTT ATCGGAAAGC AGCAGGGTGG AACCGGCACG
CAGGACGAAG TCTTCTATAC GATGGCGCTG TTCGTCGCGC CAATCCAGGC GGTGGCCGGT
GCGGTGAGTG CAGTTCCTAT CCTTGGTTGT GTGGCGTTGC CGGCGATAAT CCTGCTGGGC
ATCTACCAGA TTTATCTCGG TTACCTGGGT GTGCGCTCGA GCATGAACCT TCAGCAGACT
CCGGCGATTA TCACGCTGGT GCTGGCGTTC ATTGCGCAGT TCATCATTGG CGCTATCATC
GGTGCGATTT TTGCGACTAT CGGTGTGGCT TTGGGAGCGG CAAGCGGCAG TATCAATTTC
GGTCAGTGA
 
Protein sequence
MMVQGVSIGE MLNQSIQVLT KPSVETFERF ERHGGQREAT IYIMVAAAIS AAVSLVFGLL 
GGIVSALLAG VLGFILPVVG FYLFAFLVYF IGKQQGGTGT QDEVFYTMAL FVAPIQAVAG
AVSAVPILGC VALPAIILLG IYQIYLGYLG VRSSMNLQQT PAIITLVLAF IAQFIIGAII
GAIFATIGVA LGAASGSINF GQ