| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3039 |
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| Symbol | |
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| ID | 5540535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3937649 |
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| End bp | 3940060 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895158 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433111 |
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| Protein GI | 156742982 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0719131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCATC ATTTCCTTCC TCCGATTTTG GCGCTGGCGC TTCTCGTTGC CTGGCTATCT
CCTGCGCCGG TGGACGTGCA GGCAGTCCCA GGGCGATCCG ATTTTGGCGT CAATACCCAT
ATCGCGTCGC GCTATCCGGT GCAGGCGGGT TTTGATGGAG CAGTCGATCT GGTCGCCGGA
ACGTCTGCTG GCTGGGTGCG CGAGGATTTC CACTGGTACT GGCTTGAACC GGAGCAGGGA
CGCTTCGACT GGGCGATCTA CGATCGCGCG ATCGCGCGCC TGGCGGGGAG CGGCGTCAAT
ATTATCGGCG TGCTCAACAC AGCGCCTGCC TGGGCAACAC CGTTTCCTGA CGATGCACCG
GGTCGTCCGT CCTACTATGC GCCTGATCCT GCGGCATTCG CCCGTTTTGC GTCGGCGGTC
GTGACGCGCT ATCGCGACCG GGTGCGCTTC TGGCAGGTCT GGAATGAACC GGAGAATGTG
CGCTACTGGC AGCCTCAGCC CGACCCTGCC GCCTACGCTG CGCTGCTGCG CGCTGCGTAT
CCTGCCATCA AGTCTGCCGA TCCGAATGCC GTGGTGTTGA GCGCAGGGGT CGTTCCGACG
AACATCGGGT TTATTCGTGC CATCGCCGAC AATGGCGCCT GGGGTTCGTT CGATATTCTT
GCCGTCCATC CCTATGTCGA TCCGTTCAGC CCGGAGAATG GGCAGATCGG CGCCGGGGAT
GTGAGCGCCG TGAAAACGCT GGTCGATAAT CTGGGGCGTA AGCCGATCTG GGCAACGGAA
TTCGGGTGGT CCACCGGTCC TGCCGATCGC GATCCGCGTG GAGTGGACGA GGAGACGCAG
GCGAATTTTC TGGTGCGCGC ATCGACGCTG TTGCGCGCCG CAGGCGTCGA GAAGGTGATC
TGGTATAACT TGAAGGATAC CGAACCGCGC AATCTCTATG GCTTGCTGCG CAGGGCTGGC
GGTCCTGCCG ATCTGAGTCA GCCGAAGCCG TCACTGGCGG CATTCCGCAC GTTGAACCAG
CAACTCGCGG GCGCCGCACC TGTCGGATTG ATCGACCTGG GAGCGCGGCA GGTGGTGGTC
GATTTCGAGC AGTTCGGGAC ATGGCGGCGC GGCGATCAGC CGAATGGCTC GTTCTCTGCC
GACGGTTCAC AACGCTACAC TGGCAACATC GCCGGTCGTC TCGACTACAT CTTCCCCGGC
GGCGGCAACG ATTTCGTCGT CTTCACGCCG CGTCCGGCAA TCCCGCTCCC CGGCTCGCCT
GGTCAGTTGG GTATCTGGGT CTACGGCGAC GGCAGCGGGC ATGCGCTCAA AGTCTGGCTG
CGCGATGCTG AAGGAGAAAC ACTCCAATTT CGCCTCGGTT TCGTCGGCAG CGCAGGGTGG
TCGTTTCTCT CCACGACGAT CAACGGTCAG GTCGAGCCGT ACAACCGTAT CAGCGGCGGC
GGCAACCTGC GCCTCGATTT TCCGGCGACG CTGGTTGCCA TTGTGCTCGA TGATGAACCG
GACAGTCGCA GCGGGTCTGG CTCGATCTGG CTCGATGACC TGACAGCGAT CAGCGGTCCC
GAAGCGTATG GTGTGCGCTT TGTGCGTGGC GGCGACACGA TCGATGCGCT CTGGTCGCCA
GGTGGTGCAT TTGTGAATCT ACCGACGGCA GCACCTGTGG GTACGGTGAT CGACCGCTGG
GGCAATGCCT CGCAGATCGA TGCTGGGAAT GGGGCATTTG GCTTGAGCCT GGGTCCATCG
CCAATCTTCC TGATCCATCG CGCTGTACAG GCGTTCGCAC CGCAACCAGC ACCCGCGCCT
GCGCCGGCGC AACCGGCGCC GCAACCGTCC GCCGGACCGT GCCGCTCGTT CCCAGAGACT
GGGTTCGCGG TGTGTGGTCG GCTGCTCGAA TACTGGGAGC GGAATGGCGG GCTGCCGGTG
TTCGGCTTTC CCATTGGTCC CGAAGAAGAC ATGCTAATTG AGGGGAAGAC CGTGCGAGCG
CAATGGTTCG AGCGCAACCG ACTCGAACTG CACCCTCAGA ATGCGCCTCC CTACGATGTG
CTGCTGGGGC GATTGGGCGC CGAACGGTTG GAGGCAAGCG GGCGCAACTG GTTCGATTTT
CCGAAAGGCG ATCCGCGCGC GTCGCTCTAC TTCCCACAGA CCGGACAGGC GATTGCGCCG
GAGTTCCGCC AGTACTGGTC GTCCCATGGG TTGAACCTGG ACGGGCGACC GGGGTATACG
CTCGAAGAAA GCCTGGCGCT CTTCGGGTTG CCGCTTTCGC CGCCGCTGAT GGAAGTCAAC
CCGACCGACG GCAAGACCTA CCTGACGCAA CACTTTGAAC GTGCGCGTTT CGAGTACCAC
CCGGAAAACC GTGGAACGCC GTATGTCGTG TTGCTCGGAT TGCTGGGACG CGAGACGACG
GGGAAGAGGT AG
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| Protein sequence | MRHHFLPPIL ALALLVAWLS PAPVDVQAVP GRSDFGVNTH IASRYPVQAG FDGAVDLVAG
TSAGWVREDF HWYWLEPEQG RFDWAIYDRA IARLAGSGVN IIGVLNTAPA WATPFPDDAP
GRPSYYAPDP AAFARFASAV VTRYRDRVRF WQVWNEPENV RYWQPQPDPA AYAALLRAAY
PAIKSADPNA VVLSAGVVPT NIGFIRAIAD NGAWGSFDIL AVHPYVDPFS PENGQIGAGD
VSAVKTLVDN LGRKPIWATE FGWSTGPADR DPRGVDEETQ ANFLVRASTL LRAAGVEKVI
WYNLKDTEPR NLYGLLRRAG GPADLSQPKP SLAAFRTLNQ QLAGAAPVGL IDLGARQVVV
DFEQFGTWRR GDQPNGSFSA DGSQRYTGNI AGRLDYIFPG GGNDFVVFTP RPAIPLPGSP
GQLGIWVYGD GSGHALKVWL RDAEGETLQF RLGFVGSAGW SFLSTTINGQ VEPYNRISGG
GNLRLDFPAT LVAIVLDDEP DSRSGSGSIW LDDLTAISGP EAYGVRFVRG GDTIDALWSP
GGAFVNLPTA APVGTVIDRW GNASQIDAGN GAFGLSLGPS PIFLIHRAVQ AFAPQPAPAP
APAQPAPQPS AGPCRSFPET GFAVCGRLLE YWERNGGLPV FGFPIGPEED MLIEGKTVRA
QWFERNRLEL HPQNAPPYDV LLGRLGAERL EASGRNWFDF PKGDPRASLY FPQTGQAIAP
EFRQYWSSHG LNLDGRPGYT LEESLALFGL PLSPPLMEVN PTDGKTYLTQ HFERARFEYH
PENRGTPYVV LLGLLGRETT GKR
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