| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3032 |
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| Symbol | |
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| ID | 5540528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3929299 |
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| End bp | 3930828 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895152 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001433105 |
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| Protein GI | 156742976 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.446581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATAC GCACACGCCT GACACTTTCA TACGTCAGTT TTTTTGCGAT TGCGCTGCTG
ACGCTGCACA CCGGATTGTA CCTCATCGTG CGCGGCGTGT TGTTGAACAG CGTCGATAAC
GAACTGCGTC TGGGGGTCGA GGTACTGCGC CGCGGATTTG CCGAGAGCAA CCAGACACCC
TACGGTTACT TCCGCGACGA TCAACTGCGC GCCATTTTGT TGCGCCAGCC GCCGGTGCGC
GACTTTGAGG CGACCAGTCT GTACGTTCAG TTTTTCGACG CCGACGGCGA TCTCGTTGGT
CGTTCACCGA ACATCGGCGA AGGAGACCTG GCGGCGGCAC TGACGCTCGA CGAACAACGG
TTCGCCAGGG CGCTCGACGG AGCGGAGCAG ATTACGACCG TCGCATACGG CAATGTGCAG
ATACGCGAGT TGATGGCGCC ACTCCGCTTT TTCAACCCGG TCACCCGCCG CGAGGAGACC
GTCGGCGTGT TGCAGGTTGC ACGGTCGATG GCGGAAATTC AGTACGCGCT GCGCCTTCTC
TTTTATGCGC TGACGGTTGG CGGCGTGGTG GTGCTGCTGG CGGCGGCGCG CGGCGGCGCG
TGGCTGACGC GCGCCGCATT TCGGCCAATT GATGAAATTG CGCAGACAGC GCAGAGTATC
GTGCGCGCCG AGGACCTGAG TCGCCGCATC CCCGTTCCCC CCGCCGCCGA TGAATTGCAG
CGCCTGACAA TTACGGTCAA CGATCTGCTG GCGCGGTTGG AAGAACTGTT CAACCATCAG
CGCCGTTTTA TTGCCGATGT GTCGCACGAA CTGCGCACAC CGCTGACGGC GATGCAGGGC
AACCTCGAAG TGCTGGCGCG TGGCGCAGCG CGCGATCCGC AGTTGCTGAA CGAGTCGCTC
GATGATATGC GACGCGAAGT TGCCCGCCTG ATCCGCATGG TCAACGACCT GCTCCTGTTG
GCGCGCAGCG ACGCCGGTAT TCAGATCCGG CGCGATCCGG TGGAACTTGA TACACTCTTG
CTTGAAACCC ACCGCGAACT CCGACCGCTG GCAGGACAGG TGCAGTTGCG CATTGGCGAA
GAGGATCAGG CGGTGGTCAT CGGCGACCGC GACCGTATCA AGCAGGCGCT CCTGAATCTT
GGCATTAACG CCATTCAGCA CACGCCTCCC GGCGGCGTGG TGACGTTGAG CCTCACCATC
CGCGATGGGC ATGCCGCGCT CAGCGTCGCC GACACGGGAT ATGGCATCGC GCCACAGGAT
TTGCCGCACA TCTTTGAGCG CTTCTATCGG GCGGATCAGT CGCGTTGCCA CAACGGCGGC
GGCGCAGGTT TGGGGTTGTC CATTGTTCGC TCGGTGGTCG AGGCGCATGG CGGAAAAGTA
TTGGTTTCCA GCGAACCGGG CAAAGGGAGT GTGTTTACCA TGTTACTACC CCTGGACTCT
CAACCAGAAG TGAACGACGC TGAACTGCTC CCCCCCGATT CAGAAGCTGA AGCTGCGGGT
TACGGAATGC TGAATCGGTC CATGGAATGA
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| Protein sequence | MSIRTRLTLS YVSFFAIALL TLHTGLYLIV RGVLLNSVDN ELRLGVEVLR RGFAESNQTP
YGYFRDDQLR AILLRQPPVR DFEATSLYVQ FFDADGDLVG RSPNIGEGDL AAALTLDEQR
FARALDGAEQ ITTVAYGNVQ IRELMAPLRF FNPVTRREET VGVLQVARSM AEIQYALRLL
FYALTVGGVV VLLAAARGGA WLTRAAFRPI DEIAQTAQSI VRAEDLSRRI PVPPAADELQ
RLTITVNDLL ARLEELFNHQ RRFIADVSHE LRTPLTAMQG NLEVLARGAA RDPQLLNESL
DDMRREVARL IRMVNDLLLL ARSDAGIQIR RDPVELDTLL LETHRELRPL AGQVQLRIGE
EDQAVVIGDR DRIKQALLNL GINAIQHTPP GGVVTLSLTI RDGHAALSVA DTGYGIAPQD
LPHIFERFYR ADQSRCHNGG GAGLGLSIVR SVVEAHGGKV LVSSEPGKGS VFTMLLPLDS
QPEVNDAELL PPDSEAEAAG YGMLNRSME
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