Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3024 |
Symbol | |
ID | 5540520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3919766 |
End bp | 3920695 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895144 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001433097 |
Protein GI | 156742968 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGC CTGCCAGTCG TCCCTACCGC CACTCCCGCG ACCTCGACGC AGTCATCGAC CTGATCCTTG CCTGCCGTAC CGGAGAACGT ATCGACCTAT GGCCCCCCGT GCATGAGATC CGCGCCCGTC TCGGCACAGA AGATGGTGCG CGATTGTGGG TTGATGAGGG CGATCGTCCT GTGGCATTCG CTATGATCTG GGAAGGCAGC GTATTTTTGT ACTTTGCTCT GCCACACGCC GGTGACGAAA CACTCGAAGC GCAGGCGATT GCGTGGGCGA TGGCGTGGGC GCGCGCCAGC GCTGAGCAGC ACGGCGAACG CGTCGTTCTC TGTGTTCCCG TGTGCAACGA CGACCCGTAT CGTGCGGCAA TGCTGGCGCG CATTGGTCTG CGCCGCGGGG AGTGGCACAT GATCCGAATG CGTCGCCTGC TCCATCTCCC AATTGCCGAT CCTTCAATTC CTCCTGGTTT TGTCCTGCGT CCTGCCGCAG GCGAATCTGA AGCGCCTGCA CTCGTCGATC TCCATCATGT TGCGTTTGCG ACCGCATCCG AAACAGTCGG CGAGCGGCTG AACTGGATGC GCAGTCCTGC GTATGATTCG CGCCTTGACC TGGTTGCTGT CGCTCCCAAC GGCGCACTGG CGGCATTTTG CCGCTGTTCG GTCTGTGTCG AGGAGCATGT ACGTCTCGGA AGTGCCAGCG CCTGGGTCGA TCTGATCGGG GTGCATCCCG TGTATCGGCG TCAGGGTCTG GGGCGTGCGC TGTTGCTTCT GGCGCTGCAA AATATGCGCG CCATGGGACT GAATCAGGCG TTGCTCAGCG TCGGCAGTTG GAACAGCACC GCACAACATC TGTTCGAATC GTGTGGGTTT GTCACTATCG GTCGCGTCTT CTGGCACGTC TACGACGAAG AGATGGAGAT GGCAGTATAA
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Protein sequence | MKPPASRPYR HSRDLDAVID LILACRTGER IDLWPPVHEI RARLGTEDGA RLWVDEGDRP VAFAMIWEGS VFLYFALPHA GDETLEAQAI AWAMAWARAS AEQHGERVVL CVPVCNDDPY RAAMLARIGL RRGEWHMIRM RRLLHLPIAD PSIPPGFVLR PAAGESEAPA LVDLHHVAFA TASETVGERL NWMRSPAYDS RLDLVAVAPN GALAAFCRCS VCVEEHVRLG SASAWVDLIG VHPVYRRQGL GRALLLLALQ NMRAMGLNQA LLSVGSWNST AQHLFESCGF VTIGRVFWHV YDEEMEMAV
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