Gene Rcas_3024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3024 
Symbol 
ID5540520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3919766 
End bp3920695 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content61% 
IMG OID640895144 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001433097 
Protein GI156742968 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGC CTGCCAGTCG TCCCTACCGC CACTCCCGCG ACCTCGACGC AGTCATCGAC 
CTGATCCTTG CCTGCCGTAC CGGAGAACGT ATCGACCTAT GGCCCCCCGT GCATGAGATC
CGCGCCCGTC TCGGCACAGA AGATGGTGCG CGATTGTGGG TTGATGAGGG CGATCGTCCT
GTGGCATTCG CTATGATCTG GGAAGGCAGC GTATTTTTGT ACTTTGCTCT GCCACACGCC
GGTGACGAAA CACTCGAAGC GCAGGCGATT GCGTGGGCGA TGGCGTGGGC GCGCGCCAGC
GCTGAGCAGC ACGGCGAACG CGTCGTTCTC TGTGTTCCCG TGTGCAACGA CGACCCGTAT
CGTGCGGCAA TGCTGGCGCG CATTGGTCTG CGCCGCGGGG AGTGGCACAT GATCCGAATG
CGTCGCCTGC TCCATCTCCC AATTGCCGAT CCTTCAATTC CTCCTGGTTT TGTCCTGCGT
CCTGCCGCAG GCGAATCTGA AGCGCCTGCA CTCGTCGATC TCCATCATGT TGCGTTTGCG
ACCGCATCCG AAACAGTCGG CGAGCGGCTG AACTGGATGC GCAGTCCTGC GTATGATTCG
CGCCTTGACC TGGTTGCTGT CGCTCCCAAC GGCGCACTGG CGGCATTTTG CCGCTGTTCG
GTCTGTGTCG AGGAGCATGT ACGTCTCGGA AGTGCCAGCG CCTGGGTCGA TCTGATCGGG
GTGCATCCCG TGTATCGGCG TCAGGGTCTG GGGCGTGCGC TGTTGCTTCT GGCGCTGCAA
AATATGCGCG CCATGGGACT GAATCAGGCG TTGCTCAGCG TCGGCAGTTG GAACAGCACC
GCACAACATC TGTTCGAATC GTGTGGGTTT GTCACTATCG GTCGCGTCTT CTGGCACGTC
TACGACGAAG AGATGGAGAT GGCAGTATAA
 
Protein sequence
MKPPASRPYR HSRDLDAVID LILACRTGER IDLWPPVHEI RARLGTEDGA RLWVDEGDRP 
VAFAMIWEGS VFLYFALPHA GDETLEAQAI AWAMAWARAS AEQHGERVVL CVPVCNDDPY
RAAMLARIGL RRGEWHMIRM RRLLHLPIAD PSIPPGFVLR PAAGESEAPA LVDLHHVAFA
TASETVGERL NWMRSPAYDS RLDLVAVAPN GALAAFCRCS VCVEEHVRLG SASAWVDLIG
VHPVYRRQGL GRALLLLALQ NMRAMGLNQA LLSVGSWNST AQHLFESCGF VTIGRVFWHV
YDEEMEMAV