Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3016 |
Symbol | |
ID | 5540512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3911152 |
End bp | 3911547 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640895136 |
Product | hypothetical protein |
Protein accession | YP_001433089 |
Protein GI | 156742960 |
COG category | [S] Function unknown |
COG ID | [COG2445] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGAAC GATTGTTGCG CCTCGAAGTG AATGTGCGCG AGCTGGCGCG TTTTCGCCAG ATGTACACAA GTGAGGACGT GCGGCGTGAG CCTCATTTGG AATGGGCGTT GCGGTATGGA CTGCTGGAAG CCATTCAAAT CGTCATCGAT CTCAGTTGTC ATATCGCCAG TGAGAAAAGT CTGGGCGCGC CGGCGACGTA TGCCGAATGT GTAGACCTGT TAAGCCGCGC CGGATTATTG AGCGGTGATG TGGCGAAGGC GGTGTCGGGG ATGGTCGGCT TGCGTAACAT TCTCGTCCAA GAATACATTT CTGTAGACCT CAATCGTTTA TACAATCTGC TTGACCGTCT AGATGACTTC CGCACGTTTG CCGAACAAAT TCGGCCCTAT GTGTAG
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Protein sequence | MRERLLRLEV NVRELARFRQ MYTSEDVRRE PHLEWALRYG LLEAIQIVID LSCHIASEKS LGAPATYAEC VDLLSRAGLL SGDVAKAVSG MVGLRNILVQ EYISVDLNRL YNLLDRLDDF RTFAEQIRPY V
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