Gene Rcas_3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3016 
Symbol 
ID5540512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3911152 
End bp3911547 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content53% 
IMG OID640895136 
Producthypothetical protein 
Protein accessionYP_001433089 
Protein GI156742960 
COG category[S] Function unknown 
COG ID[COG2445] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAAC GATTGTTGCG CCTCGAAGTG AATGTGCGCG AGCTGGCGCG TTTTCGCCAG 
ATGTACACAA GTGAGGACGT GCGGCGTGAG CCTCATTTGG AATGGGCGTT GCGGTATGGA
CTGCTGGAAG CCATTCAAAT CGTCATCGAT CTCAGTTGTC ATATCGCCAG TGAGAAAAGT
CTGGGCGCGC CGGCGACGTA TGCCGAATGT GTAGACCTGT TAAGCCGCGC CGGATTATTG
AGCGGTGATG TGGCGAAGGC GGTGTCGGGG ATGGTCGGCT TGCGTAACAT TCTCGTCCAA
GAATACATTT CTGTAGACCT CAATCGTTTA TACAATCTGC TTGACCGTCT AGATGACTTC
CGCACGTTTG CCGAACAAAT TCGGCCCTAT GTGTAG
 
Protein sequence
MRERLLRLEV NVRELARFRQ MYTSEDVRRE PHLEWALRYG LLEAIQIVID LSCHIASEKS 
LGAPATYAEC VDLLSRAGLL SGDVAKAVSG MVGLRNILVQ EYISVDLNRL YNLLDRLDDF
RTFAEQIRPY V