| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3011 |
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| Symbol | |
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| ID | 5540507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3906682 |
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| End bp | 3908460 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895133 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_001433086 |
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| Protein GI | 156742957 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.980202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACA CCATTCTGGT CGCAGTTGCC TGGCCCTACG CCAACGGTCC ATTTCACGTC
GGTCATATCG CGGGCGCCTA TTTGCCTGCC GATGTCTTTG CGCGCTACCA TCGCCTGCGC
GGACATCGGA CCCTGATGGT TTCCGGTTCC GACTGCCATG GCACGCCGAT CACGATTGCT
GCCGAACGCG AAGGCATCAC GCCGCAGGAC GTCATCCGGC GCTACCATCC GACCTTTCTC
AAGACCTTTC AGGCGCTTGG CATTTCGTTC GATCTGTTCA CGCAGACCTA TACCGACAAC
CACTACCGCG TGACGACCGA TATGTTCCTG CGGTTGCTGG AAAATGGCTA CCTCTATAAA
GAAACAATGG TCGGCTCCTA TTCCGAAACG CTGGGACGCT TCCTGCCGGA CCGCTTTGTA
GAGGGAACCT GCCCGAATTG CGGGTATCCG CGTGCGCGCG GCGATCAATG CGATAGTTGC
GGGCATCTGC ATGATCCGCA GGACCTTATT GCGCCGCGTT CGGTGCTCGA TGGTGCGCCG
GTCACCTTCC GTGAGACCGA GCACTTCTTC CTTGACCTGG CGAAACTCGA ACCACAACTG
CGCGCCTGGA TCGAGAGTGT TGACCGGAGT TACTGGCGCG CGAATACGCT GCTTTTCACC
CAGAACTGGC TGCGCGAAGG GTTGCGTGGG CGCGCCATCA CCCGCGACCT GGAGTGGGGC
GTGCCGGTGC CGGTCGATGA TCCGGCGTTC AAAGACAAGC GCATCTACGT CTGGTTCGAT
GCCGTCATCG GCTATTACTC GGCGTCGGTC GAATGGGCGG AGCGCACCGG CGCACCGGAT
GCCTGGAAGG ACTGGTGGGT TTGTCTGCCC GATGGCTCAG CTCCGGCGCG TTCGTACTAT
TTCATCGGAA AGGACAATAT CCCTTTCCAT ACGATTATCT GGCCCGCAAT GCTGATCGGC
TATGGCAACC TGGCGCTGCC CTATGATGTG CCGGCCAACG AGTTTCTCAA TCTCGAAGGC
GACAAGATGA GCACCAGTCG CAACTGGGCG CTTTGGGCGC CGGAGATTGA AGATCGGTAT
CAACCCGATG CCATTCGCTA CTACCTGATT GCCAACGGAC CGGAGACACG CGACAGCAAT
TGGAGTTGGG CAGATTTCGT GCAGCGGGTC AACAGTGAAC TGGTAGCGAC ATGGGGCAAT
CTGGCAAACC GGGTGCTCAG CATTACCCAT CGCAATTTTG GCGCCGTTCC GCAACCCGGT
GAGTTGACCG ACGCTGATCG TCAGTTGATT GCTGCGACCC AGCAGACATT CGAGAGCGTC
ACAGCGCTGC TCGATGGGGT CAAATTACGT GCGGCGCTGA GCGAGGCTAT GGCGCTGGCG
CAGACGGCGA ACCAGTATCT CAGCGAGCAA GAGCCGTGGA AACTCGTCAG GCATGATCAA
GAACGCGCTG CCACGGTGTT GTTTGTGGCG CTGCGCACGG TCGATACGCT CAAGGTGCTG
TTCTGCCCAT TTTTACCGTT TAGCAGCCAG CGCTTGCACG AATTGCTCGG CTACACCGGA
ACCATCGCAC CGCAACCGCA CGTCGAAGAA ACGACTGCGC CAGATGGATT GCCACGCCTC
GTGCTCACCG GCGACTACCG CGCCAGCGCC GGCGCCTGGA GGATCAGTGT GCTGCCGCCA
GGACAACCGA TCCAACCGCC GACGCCGCTC TTTCAGAAAC TGGACGAGGC GATTATCGCT
GAGGAACTTG CGCGTTTGCG CGCAAAAGTG CGTTTGTGA
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| Protein sequence | MPDTILVAVA WPYANGPFHV GHIAGAYLPA DVFARYHRLR GHRTLMVSGS DCHGTPITIA
AEREGITPQD VIRRYHPTFL KTFQALGISF DLFTQTYTDN HYRVTTDMFL RLLENGYLYK
ETMVGSYSET LGRFLPDRFV EGTCPNCGYP RARGDQCDSC GHLHDPQDLI APRSVLDGAP
VTFRETEHFF LDLAKLEPQL RAWIESVDRS YWRANTLLFT QNWLREGLRG RAITRDLEWG
VPVPVDDPAF KDKRIYVWFD AVIGYYSASV EWAERTGAPD AWKDWWVCLP DGSAPARSYY
FIGKDNIPFH TIIWPAMLIG YGNLALPYDV PANEFLNLEG DKMSTSRNWA LWAPEIEDRY
QPDAIRYYLI ANGPETRDSN WSWADFVQRV NSELVATWGN LANRVLSITH RNFGAVPQPG
ELTDADRQLI AATQQTFESV TALLDGVKLR AALSEAMALA QTANQYLSEQ EPWKLVRHDQ
ERAATVLFVA LRTVDTLKVL FCPFLPFSSQ RLHELLGYTG TIAPQPHVEE TTAPDGLPRL
VLTGDYRASA GAWRISVLPP GQPIQPPTPL FQKLDEAIIA EELARLRAKV RL
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