| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2999 |
|---|
| Symbol | |
|---|
| ID | 5540495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 3892463 |
|---|
| End bp | 3893413 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640895121 |
|---|
| Product | LAO/AO transport system ATPase |
|---|
| Protein accession | YP_001433074 |
|---|
| Protein GI | 156742945 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family |
|---|
| TIGRFAM ID | [TIGR00750] LAO/AO transport system ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0703569 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACCTGG TACAGGCGTT GCTGTCCGGC CATCGGCGCG CGCTGGCACA GGCGCTGACC
CTTGTGGAAA CCGGCGGTCC GCAGGCGCGC GCCCTTCTTG GCGCACTGTT CGCGCACACC
GGTCGCGCGC ATATCATTGG CGTGACCGGC GCACCCGGCG CCGGTAAATC GACGCTGGTC
ACCGCGCTGG CAGCGCACTG GCGGCGCACC GGTCGGACGG TTGGCATTAT TGCGGTCGAT
CCGACGTCGC CATTCACGCG CGGCGCTCTT CTCGGCGACC GAATCCGCAT GCAGGCCCTC
AGCGGCGATC CCGGCGTGTT TATTCGCAGT ATGGCAAGCC GCGGGCGGCT GGGGGGTATT
GCCCGCGCCA CCGGCGATGC AGTGGCACTG CTCGACGCCG CCGGATTCGA TCTGGTGCTG
ATCGAGACGG TCGGCGCCGG TCAGGGTGAG GTCGAGATCG CCGCGGCGGC TCATACCACA
ATTGTTATCG AAATCCCCGG CGCCGGTGAT GATATTCAGG CTATCAAAGC CGGCATTCTC
GAAATCGCCG ATGTGCTGGT GGTTAACAAA GCCGATCGCG ACGGCGCGGA ACAGACGGTT
CGCCAGTTGC GCGCGATGCT GAGCCTGGCT GACCTGCCGG TTGACGGCTG GACCCCTCCG
GTATTGACTG CTGTCGCTAT GCGCGGCGAA GGTATCGAAG CGATTGCGAC GGCAGCAGAG
CGACATCTGG CCTATCTCCG CGAAAGCGAG CGCTTGACCC GGCGCGAGCA GGAACGCGCC
GAGCGTGAAC TGCGGTTGAT CCTCCAGGAA ACAGCACTCG AGCGGGTGCG TGCGCATGTC
GCGCCGTCTG ATTGGGAGGC ATTGATTGCC CAGATCGTCG CGCGCGCGCT CGATCCGTAT
ACCGCTGCGA ATCGCCTGCT TGAGCGCGTG CTCCCACAGT CGGGCGGATA A
|
|---|
| Protein sequence | MDLVQALLSG HRRALAQALT LVETGGPQAR ALLGALFAHT GRAHIIGVTG APGAGKSTLV
TALAAHWRRT GRTVGIIAVD PTSPFTRGAL LGDRIRMQAL SGDPGVFIRS MASRGRLGGI
ARATGDAVAL LDAAGFDLVL IETVGAGQGE VEIAAAAHTT IVIEIPGAGD DIQAIKAGIL
EIADVLVVNK ADRDGAEQTV RQLRAMLSLA DLPVDGWTPP VLTAVAMRGE GIEAIATAAE
RHLAYLRESE RLTRREQERA ERELRLILQE TALERVRAHV APSDWEALIA QIVARALDPY
TAANRLLERV LPQSGG
|
|---|
| |