| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2997 |
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| Symbol | |
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| ID | 5540493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3891056 |
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| End bp | 3892042 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895119 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_001433072 |
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| Protein GI | 156742943 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.268704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0386935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAGA TTGCTATCAT CGGCGTTGGA CTGATCGGCG CTTCCCTTGG GATGGCGCTG
CGTTCTGCGA ACGAGCGCGA GTCGCCATTG GGCGCGATCA CGGTGACCGG TTTCGACACC
AATGCGCGCG CCCTTTCGGA GGCGCGCGGT CGCCTGGCTA TTGATCGCGA GGCGCGCACG
CTGGCTGATG CAGTGCGCGA TGCGCATCTG GTGATCGTTG CGGTTCCGGT GCAGGCGATC
CGCGCGGTAT TTGCCGATCT TGCACCGCTG TTGCCCGCCG GGGCAACGGT CACCGATGTA
GCAAGCACCA AGACACAGGT CCTTGCCTGG GCGCGCGAAC TTCTGCCCAC AACCGTCGAT
TTCATTGGCG GGCACCCAAT GGCCGGGAGC GAAAAGTCTG GTCCTGCGGC TGCATCGCCC
GATCTCTTCC GCAATGCCAT CTACTGCCTC TCACCACGCG AACATGCCCG CGAAACGGCG
GTGCGCCTTG TTGAGGCAAT GGTCGAGCAG ATTGGCGCAA AACTCTACTA TATCGACCCG
GTCGAGCACG ATGCGTATGT GGCAGGCGTC TCGCATCTGC CGTTTATGCT CTCGACGGCG
TTGATGGATG TTGTGAGTCG CAGTCCCGGT TGGCGCGAGA TGGCGCCGCT GGCGGCAACC
GGTTTCCGCG ATGTGACCCG GCTGGCATCG GGCAGCGCCG AGATGCACCG CGACATTTGT
CTGACCAACC GCGAGGCGCT GGCGCGCTGG CTCGATGATA TGGCGCAGCG CCTGGCAGAA
CTGCGCGATC AGGTCGCCGC TGGCGATGGC GAGGCGCTGC TGGCATGGTT TCGCCATGCT
CAGGAGGCGC GCGAACAGTG GCTGGCGGCA CGCCCGAACA TGCGTCCAGG CGAGCAGGAG
TTCAATGAAA TGATAGATAT GGCATATGAG CGACCGGGTC TCTTTGGGCG CTGGGGGTCT
GGTCCACGTC AGCGCAAACA GCCGTAA
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| Protein sequence | MIQIAIIGVG LIGASLGMAL RSANERESPL GAITVTGFDT NARALSEARG RLAIDREART
LADAVRDAHL VIVAVPVQAI RAVFADLAPL LPAGATVTDV ASTKTQVLAW ARELLPTTVD
FIGGHPMAGS EKSGPAAASP DLFRNAIYCL SPREHARETA VRLVEAMVEQ IGAKLYYIDP
VEHDAYVAGV SHLPFMLSTA LMDVVSRSPG WREMAPLAAT GFRDVTRLAS GSAEMHRDIC
LTNREALARW LDDMAQRLAE LRDQVAAGDG EALLAWFRHA QEAREQWLAA RPNMRPGEQE
FNEMIDMAYE RPGLFGRWGS GPRQRKQP
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