Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2985 |
Symbol | |
ID | 5540477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3871146 |
End bp | 3871895 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640895103 |
Product | hypothetical protein |
Protein accession | YP_001433060 |
Protein GI | 156742931 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0275079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000737309 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCGCG CATGCCCACG ACCATGCCCT TTTGTTCATC GCCATCGTCA TGACCTGATC CGGCTCCGCG ATCACCTTGC CGAAGGTCAC CGGTGCGCCG ATGCATGGGT AGCGCTGGCG CACCTGGTGC GCGAACCCTG GCAGCGCCTG GACTGCCTGG AGCGCGCGTC CGCCATTGAC CCGAACGATC AGAACCTGCG CATCGCACAC CTGGAACATT ATGTCGTATT GCACCCGGAA GATACGCAGG CAGCCGAGGA ACTGCGGGAG GCAAAGGCGC GCCGTGCCCT GGAACGCTAC AAGCCGCGCA TCTTCCGGCA TCAGGACGCT TCACAGCCAA TTGGCGTCAT CCTCCGCGCA CTCCACGCCG TCAACGATGC CGACCTCGAA GTAGCGCTGG AAGAGCAGGA GCGACTCCGC CGCCTGGGGC GACCGATGCT TCTGGGAGAC CTGCTCGTTC TGCGTGGCAA GACCGCACCA GAAGCGCTGG CGCGCGCGCT GACACTGCAA AGCCGCCTCC GCGCCGCCAA CGGCGCGATG CCGCGCACAC TCAGCGAGTA TCTGATGGCG AAAGGGCACG TTACTCCCGA TCAACTCGAA CGCGCATTGA TCGAGCAGAT TCGGCTTCAC ACTTCTGGGA AACACGAACC GCTCGGCGAA ATCCTGCTGC GCCAGGGCGC GGTCGATACT ACCATCCTGC AACGCGCCTT CCAGCAACAC ATGCATGATG CGATGACGGC GTTTGTGTAA
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Protein sequence | MSRACPRPCP FVHRHRHDLI RLRDHLAEGH RCADAWVALA HLVREPWQRL DCLERASAID PNDQNLRIAH LEHYVVLHPE DTQAAEELRE AKARRALERY KPRIFRHQDA SQPIGVILRA LHAVNDADLE VALEEQERLR RLGRPMLLGD LLVLRGKTAP EALARALTLQ SRLRAANGAM PRTLSEYLMA KGHVTPDQLE RALIEQIRLH TSGKHEPLGE ILLRQGAVDT TILQRAFQQH MHDAMTAFV
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