Gene Rcas_2983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2983 
Symbol 
ID5540475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3866866 
End bp3867240 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content58% 
IMG OID640895101 
Productferredoxin 
Protein accessionYP_001433058 
Protein GI156742929 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00931519 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00068952 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAACAC TGACAGTCGC CGGCAAAACA GCAGAATGGA GCGCAGACAA GCGGTTGGTG 
AACGCGATTG AGGACATGGG CATCCACATC GGGCATCGAT GCGGCGGTCA GGCGCGCTGC
ACCACGTGCC GGGTTACGTT CATTTCAGGC GAACCAGACA CTATGACTGC GGCTGAATAT
CAGAAACTCA GCGAGCGCGG GTTGCTCGGG CAATATCGCC TTTCCTGTCA GATTCTCTGC
ACCCACGATA TGGAAGTCGA GCCGATCATG ACTCTGGAGA ACCAGGAAGG GTGGAGTGAC
ACCGGTCCGC GCCCGGCGGA TGTCGTCGAA CCGGTGGCGG AGTGGTTGCC TAAATCGACG
TTTGGGGTAT CCTGA
 
Protein sequence
MPTLTVAGKT AEWSADKRLV NAIEDMGIHI GHRCGGQARC TTCRVTFISG EPDTMTAAEY 
QKLSERGLLG QYRLSCQILC THDMEVEPIM TLENQEGWSD TGPRPADVVE PVAEWLPKST
FGVS