Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2983 |
Symbol | |
ID | 5540475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3866866 |
End bp | 3867240 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640895101 |
Product | ferredoxin |
Protein accession | YP_001433058 |
Protein GI | 156742929 |
COG category | [C] Energy production and conversion |
COG ID | [COG0633] Ferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00931519 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00068952 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAACAC TGACAGTCGC CGGCAAAACA GCAGAATGGA GCGCAGACAA GCGGTTGGTG AACGCGATTG AGGACATGGG CATCCACATC GGGCATCGAT GCGGCGGTCA GGCGCGCTGC ACCACGTGCC GGGTTACGTT CATTTCAGGC GAACCAGACA CTATGACTGC GGCTGAATAT CAGAAACTCA GCGAGCGCGG GTTGCTCGGG CAATATCGCC TTTCCTGTCA GATTCTCTGC ACCCACGATA TGGAAGTCGA GCCGATCATG ACTCTGGAGA ACCAGGAAGG GTGGAGTGAC ACCGGTCCGC GCCCGGCGGA TGTCGTCGAA CCGGTGGCGG AGTGGTTGCC TAAATCGACG TTTGGGGTAT CCTGA
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Protein sequence | MPTLTVAGKT AEWSADKRLV NAIEDMGIHI GHRCGGQARC TTCRVTFISG EPDTMTAAEY QKLSERGLLG QYRLSCQILC THDMEVEPIM TLENQEGWSD TGPRPADVVE PVAEWLPKST FGVS
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