Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2981 |
Symbol | |
ID | 5540473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3865625 |
End bp | 3865999 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640895099 |
Product | hypothetical protein |
Protein accession | YP_001433056 |
Protein GI | 156742927 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0467392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000698797 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTGGTCGG TGCATCGTGT GGCGCTGCTG ATCCTGGCGC TTGTGGCAGT CGGCGGTGCA GGTGTGGGCA TCTGGTATGA GAACCAGCAG CGTAGTGCAG AACGCCACCT TGTCTTTACC GTGCCGCCGG GCAGTGTGGC GCGCCTTGCA GCAGGCGAAC AACTCGAAAT CTTGCCGCAA ACCATTGAAC TGTCGCTTCG GGGCAAAGAT ACGCTGGTGA TCCGCAATGA CGATGTGCAG CCGATTCAGG TTGGACCGTT CAAGATCGAT CCGGGCCAAC AGTTCGAGCA GCGCTACTAC AATCCCGGAA CATACGAATT GATCTGCACT CTGCACCAAT CGCAACGTCT TCGCATCGTG GTATCGCGCG AATAA
|
Protein sequence | MWSVHRVALL ILALVAVGGA GVGIWYENQQ RSAERHLVFT VPPGSVARLA AGEQLEILPQ TIELSLRGKD TLVIRNDDVQ PIQVGPFKID PGQQFEQRYY NPGTYELICT LHQSQRLRIV VSRE
|
| |