Gene Rcas_2981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2981 
Symbol 
ID5540473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3865625 
End bp3865999 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content57% 
IMG OID640895099 
Producthypothetical protein 
Protein accessionYP_001433056 
Protein GI156742927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0467392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000698797 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGTCGG TGCATCGTGT GGCGCTGCTG ATCCTGGCGC TTGTGGCAGT CGGCGGTGCA 
GGTGTGGGCA TCTGGTATGA GAACCAGCAG CGTAGTGCAG AACGCCACCT TGTCTTTACC
GTGCCGCCGG GCAGTGTGGC GCGCCTTGCA GCAGGCGAAC AACTCGAAAT CTTGCCGCAA
ACCATTGAAC TGTCGCTTCG GGGCAAAGAT ACGCTGGTGA TCCGCAATGA CGATGTGCAG
CCGATTCAGG TTGGACCGTT CAAGATCGAT CCGGGCCAAC AGTTCGAGCA GCGCTACTAC
AATCCCGGAA CATACGAATT GATCTGCACT CTGCACCAAT CGCAACGTCT TCGCATCGTG
GTATCGCGCG AATAA
 
Protein sequence
MWSVHRVALL ILALVAVGGA GVGIWYENQQ RSAERHLVFT VPPGSVARLA AGEQLEILPQ 
TIELSLRGKD TLVIRNDDVQ PIQVGPFKID PGQQFEQRYY NPGTYELICT LHQSQRLRIV
VSRE