| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2971 |
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| Symbol | |
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| ID | 5540462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3854884 |
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| End bp | 3856116 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895090 |
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| Product | cysteine desulfurase family protein |
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| Protein accession | YP_001433048 |
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| Protein GI | 156742919 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01976] cysteine desulfurase family protein, VC1184 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000129059 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000905656 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGCCC TCGATCTGAC CTGGATTCGT GCTCAGTTTC CTGCCTTGAT GCAGGAAATG
AACGGTCGTC CCGTCGTGTT TTTCGACGGT CCTGGAGGAA CGCAGGTTCC CCGGCGGGTG
ATTGACGCAA TGGCGGAGTA TCTGACTCTG TATAACTCGA ATACGCATGG CGCTTTTGCG
ACCAGCCAGC GTACCGATGC AACGGTTGAC GCCGCGCGTG TTGCCATGGC TGATTTTCTG
GGATGCGACG CTGATGAGGT GGTCTTTGGT CCGAACATGA CCACGCTGAC CTTTGCGATC
AGCCGGGCAT TCGGGCGCGA TATCCGCCCC GGCGACGAGA TTGTGGTCAC CCGCCTGGAT
CACGATGCGA ACGTGGCGCC CTGGCAGGCG CTCGAAGAAC GTGGTGCGAT CATTCGCATG
GTCGATATCG ATGTGGAAGA TTGCACGCTC GACATGGCGG ACATGGCGCG CGCGATCAAT
TCCCGCACGA AGCTGGTTGC AGTCGGATAT GCATCGAATG CGGTTGGCAC AATCAACGAT
GTGGCCACCA TCACGCGGAT GGCACACGAC GTCGGTGCGC TGGTGTACAT CGATGCCGTC
CACTACGCCC CCCATGGTCC TATCGATGTG CGCGCGCTCG ACTGTGATTT TCTGGCATGC
TCACCCTACA AGTTTTTCGC ACCGCATATG GGAGCGCTTT ACGGCAAGCG CGAGCATCTG
GAACGTCTGC GTCCGTACAA AGTGCGTCCC GCTTCTGATG CGGTTCCCGA CCGCTGGGAG
ACCGGCACGA AAAACCACGA AGGGCTGGCG GGGGTCACGG CGGCAATCGA CTATCTGGCG
GAACTGGGTC GGCGGGTGAA ACCGACGACG ACGCGGCGCG CGGCGCTTGT GCAGGCGATG
GAGGCTATTC AGGCATATGA GCGCACTCTC TCACACCATC TGATCGCCGG TCTGCTCGCC
ATACCAGGAT TGACATTCTA CGGCATCAGC GATCCGGCGC GCTTTGCATG GCGCACACCA
ACCGTCGCGG TGCGTCTGGA GGGGAGCACT CCGCGCGAAC TTGCCAGGCG CCTGGGCGAT
CAGGGTATTT TCTGCTGGGA CGGCAACTAC TATGCGATCA ATCTGACAGA GCGCCTCGGC
GTCGAAGCAG ACGGCGGCAT GCTACGGATT GGACTGGTGC ACTACAATAC CGCAGAGGAG
ATCGATCGGT TGCTGGAGGT GATGAGGGGT TAG
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| Protein sequence | MSALDLTWIR AQFPALMQEM NGRPVVFFDG PGGTQVPRRV IDAMAEYLTL YNSNTHGAFA
TSQRTDATVD AARVAMADFL GCDADEVVFG PNMTTLTFAI SRAFGRDIRP GDEIVVTRLD
HDANVAPWQA LEERGAIIRM VDIDVEDCTL DMADMARAIN SRTKLVAVGY ASNAVGTIND
VATITRMAHD VGALVYIDAV HYAPHGPIDV RALDCDFLAC SPYKFFAPHM GALYGKREHL
ERLRPYKVRP ASDAVPDRWE TGTKNHEGLA GVTAAIDYLA ELGRRVKPTT TRRAALVQAM
EAIQAYERTL SHHLIAGLLA IPGLTFYGIS DPARFAWRTP TVAVRLEGST PRELARRLGD
QGIFCWDGNY YAINLTERLG VEADGGMLRI GLVHYNTAEE IDRLLEVMRG
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