| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2966 |
|---|
| Symbol | |
|---|
| ID | 5540457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 3846842 |
|---|
| End bp | 3847738 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640895085 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001433043 |
|---|
| Protein GI | 156742914 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000140905 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACATACC ACACTCGTTC TGCTCCTGCT GCAACAACCT ATGCTCAGGC TGGTCCATTG
ACCGACCTGT CGGCATATCG CACACAACTC GCTCCTCTTC CAGAAACCAT CGCCGATCTC
TGCCGCGTGG TTCAGGGAGT GCTGATGCAT ACCTTCTGGC AGGGTCGGGA TACTCGACCA
TTGACCGAGG AGCACAGGCA AGCCCTCTAC GCGCGATCAG CCGCCGTAAA ACTGGCTGCC
ATCCTTCACC TCGACGATCG ACCGCTCACG ATTGCGCGTT CACCGGATCG ACGTCTGCCT
GCAACATCGC GCGACCACAG TCTGCTCCTG GTGGCGCTGC TTCGCCACCA ACGTGTTCCG
GCGCGGTCAC GTTGCGGCTT TGTCACCTAT ATTGCGCCGC AGCACTATGA AGAACACTGG
CTGGTTGAGT ACTGGGACGA CACTGAGGGT CGCTGGATTC TGGTCGATCC GCAGATGGAT
GCCGATCAAC GCGCGGCATT GAATGTCACC TTCGATCCGC TCGATATTCC ACGGACTCGC
TTCCTGAGCA GCGGTGCGGC CTGGCAGCAC TGTCGGTCGG GCACACTCGA CCCCTCGCTC
TTTGGTCACC TCGAAGACCG GGGTATGCAT GCGATCCGCT GCACCCTGAT CCGCGATCTG
GCAGCGCTTA ATCGTGTCGA AATGCAGCCA TGGGATCGCT GGGGGCTGAT GCTGCCGCCG
GACGAAATGC TGAACGATGC GGACATGACA CTGCTCGACA CCGTGGCGCA TGCGACCGTC
GGCGCCGTAG CGACACCTTC TGCCGATGCC GTCGAGGCGC TCTATGCCTC GGACTCCCGT
CTTCGCCCGC CGTACCCGTG GCTGGTTACG CCGGGTATTA TACCAATGAC GATTTAA
|
|---|
| Protein sequence | MTYHTRSAPA ATTYAQAGPL TDLSAYRTQL APLPETIADL CRVVQGVLMH TFWQGRDTRP
LTEEHRQALY ARSAAVKLAA ILHLDDRPLT IARSPDRRLP ATSRDHSLLL VALLRHQRVP
ARSRCGFVTY IAPQHYEEHW LVEYWDDTEG RWILVDPQMD ADQRAALNVT FDPLDIPRTR
FLSSGAAWQH CRSGTLDPSL FGHLEDRGMH AIRCTLIRDL AALNRVEMQP WDRWGLMLPP
DEMLNDADMT LLDTVAHATV GAVATPSADA VEALYASDSR LRPPYPWLVT PGIIPMTI
|
|---|
| |