Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2961 |
Symbol | |
ID | 5540452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3841660 |
End bp | 3842343 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640895081 |
Product | regulatory protein RecX |
Protein accession | YP_001433039 |
Protein GI | 156742910 |
COG category | [R] General function prediction only |
COG ID | [COG2137] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00629613 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000594153 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAGAAG GGGTTATTAC CGCGCTGCGT GTCCAGGAAC ACGATACGCA GCGCGTCAAC ATCTATATCG ATCATGCATT TGCGCTTGGG GTCAGCCTTG CGACGGTTGT GCGTGAACGG TTGTACGTCG GCATGCATCT CGATGCTGCG ACCTGCGCTC GCATTGAGGC GACCGAGATT GTCGAGCGTG CCGTGCAGAT TGCGCTGCGC GCCATTGAGT CCCGCCCACG CTCGGTGGCT GAAATCCGCG ACCGCCTGCA CCGTAAGGGT TTTGCGCCTG AGACGATTGA TGCTGCGGTT GAACGGCTGC ACACGAGCGG GTTGCTCGAC GATGCCGCCT TTGCGCACTT CTGGATCGAG AACCGGCAGA TGTGCCGACC GCGTGGACGC CACGCCCTCG CCGATGAATT GCGCCGCAAG GGAGTGAGCG CCGAACTCGT GGCCAGCGCA CTAAACGCGA CGCTGACCGA CAATGAAACG GCGCGCGCCG AAACGCTGGC GCGCGCGGCA ATGCGGCGTT ACGCCAGCGT CGCCGACTAC CAGACGTTTC TTCGCCGACT CGGCGGCTAC CTGCAACGCC GTGGCTTCAG TGCCGAAACA ATCCTTCCGA TTGTCGAACG CCTCTGGCGT GAACGTGGCG GCGACTCGGA AGTCGTTGAC CGATCGCTCC TTGCGGAGCA GTAA
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Protein sequence | MPEGVITALR VQEHDTQRVN IYIDHAFALG VSLATVVRER LYVGMHLDAA TCARIEATEI VERAVQIALR AIESRPRSVA EIRDRLHRKG FAPETIDAAV ERLHTSGLLD DAAFAHFWIE NRQMCRPRGR HALADELRRK GVSAELVASA LNATLTDNET ARAETLARAA MRRYASVADY QTFLRRLGGY LQRRGFSAET ILPIVERLWR ERGGDSEVVD RSLLAEQ
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