Gene Rcas_2961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2961 
Symbol 
ID5540452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3841660 
End bp3842343 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content62% 
IMG OID640895081 
Productregulatory protein RecX 
Protein accessionYP_001433039 
Protein GI156742910 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00629613 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000594153 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAGAAG GGGTTATTAC CGCGCTGCGT GTCCAGGAAC ACGATACGCA GCGCGTCAAC 
ATCTATATCG ATCATGCATT TGCGCTTGGG GTCAGCCTTG CGACGGTTGT GCGTGAACGG
TTGTACGTCG GCATGCATCT CGATGCTGCG ACCTGCGCTC GCATTGAGGC GACCGAGATT
GTCGAGCGTG CCGTGCAGAT TGCGCTGCGC GCCATTGAGT CCCGCCCACG CTCGGTGGCT
GAAATCCGCG ACCGCCTGCA CCGTAAGGGT TTTGCGCCTG AGACGATTGA TGCTGCGGTT
GAACGGCTGC ACACGAGCGG GTTGCTCGAC GATGCCGCCT TTGCGCACTT CTGGATCGAG
AACCGGCAGA TGTGCCGACC GCGTGGACGC CACGCCCTCG CCGATGAATT GCGCCGCAAG
GGAGTGAGCG CCGAACTCGT GGCCAGCGCA CTAAACGCGA CGCTGACCGA CAATGAAACG
GCGCGCGCCG AAACGCTGGC GCGCGCGGCA ATGCGGCGTT ACGCCAGCGT CGCCGACTAC
CAGACGTTTC TTCGCCGACT CGGCGGCTAC CTGCAACGCC GTGGCTTCAG TGCCGAAACA
ATCCTTCCGA TTGTCGAACG CCTCTGGCGT GAACGTGGCG GCGACTCGGA AGTCGTTGAC
CGATCGCTCC TTGCGGAGCA GTAA
 
Protein sequence
MPEGVITALR VQEHDTQRVN IYIDHAFALG VSLATVVRER LYVGMHLDAA TCARIEATEI 
VERAVQIALR AIESRPRSVA EIRDRLHRKG FAPETIDAAV ERLHTSGLLD DAAFAHFWIE
NRQMCRPRGR HALADELRRK GVSAELVASA LNATLTDNET ARAETLARAA MRRYASVADY
QTFLRRLGGY LQRRGFSAET ILPIVERLWR ERGGDSEVVD RSLLAEQ