Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2958 |
Symbol | |
ID | 5540449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3838009 |
End bp | 3839109 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640895078 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001433036 |
Protein GI | 156742907 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.298871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000213048 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCATCT TGATGCTTTC CAAAGCGCTG GTCAACGGCG CATACCAGAA GAAGTGCGAA GAATTGGCAG CATTGCCAGA CGTTGAACTG ATCGTCGCCG TGCCACCTGC CTGGCGTGAA CCGCGTGTCG GCGTCATTCC GCTCGAACGG CGCTTCACCC GCGGCTATCG CCTTGTCACG CTGCCGATTG TACTCAACGG TCGCCACCAT CTCCACTTCT ACCCCACGTT CAGCCGGTTG GTGCGCCAGG TGCGCCCCGA TATTCTGCAC GCCGATGAAG AATCGTTCAA TCTGGCGACA TTTCTGGCAC TCCGCGCTGG CGTACAGCAC GGCGCGCGCT GCTGCTTCTA CAACTACGCC AATATCGACC GCTACTACCC GCCGCCGTTC AACCTGTTCG AACGCTACGC CTTTCGGCAC GCCGCTCACG CCTTCGCATG CAGCGCAGAG GCGGAAGCGA TCATGCGTCG CCACGGCTAC GCCGGACCGC TCACCATCCT GCCGCAGTTT GGCGTCGATC CCGATCTGTA CGCTCCGGCG CAGCGCGACC GCTCGAACGC GGCGACGATT GTCGGGTACA TCGGGCGTCT GGTGCCGGAA AAGGGAGTGC TCGACCTGGT GGAAGCCGTG GCGCGTGTGC CGTCGGTGCG CCTGCGGCTG ATCGGCGACG GCGCGCTACG TCCGTTCATC GAGGCGCGGA TCGCTGCACT CGACATTGGC GAGCGCATCG AACTCCACCC CGCCATCCCA TCGACCCGCG TTCCCGATGA ACTGCGCCGT CTCGACGCGC TCGTGTTGCC CTCACACACA ACGCGCACTT GGAAGGAACA GTTCGGGCGC ATCCTGATTG AAGCCATGAG CTGCGCAGTT CCGGTCATCG GCTCCTCATC GGCTGCCATC CCCGACGTCA TCGGCGACGC CGGGATCATC TATCCCGAAG GCGACATTGC CGCACTCGCA GGAGCATTGC GACGGGTAGC GGACGATCCG GCGCTGCGCA ACGACCTCGG ACGGCGCGGA CGGGAACGTG TGCTGGCGCA GTTCACGCAG GCGGCGATTG CCCGTGCGTA TCATGACGCA TATCGTTCGA TGCTGAATTG A
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Protein sequence | MRILMLSKAL VNGAYQKKCE ELAALPDVEL IVAVPPAWRE PRVGVIPLER RFTRGYRLVT LPIVLNGRHH LHFYPTFSRL VRQVRPDILH ADEESFNLAT FLALRAGVQH GARCCFYNYA NIDRYYPPPF NLFERYAFRH AAHAFACSAE AEAIMRRHGY AGPLTILPQF GVDPDLYAPA QRDRSNAATI VGYIGRLVPE KGVLDLVEAV ARVPSVRLRL IGDGALRPFI EARIAALDIG ERIELHPAIP STRVPDELRR LDALVLPSHT TRTWKEQFGR ILIEAMSCAV PVIGSSSAAI PDVIGDAGII YPEGDIAALA GALRRVADDP ALRNDLGRRG RERVLAQFTQ AAIARAYHDA YRSMLN
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