| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2950 |
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| Symbol | |
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| ID | 5540440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3826018 |
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| End bp | 3829002 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895070 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433029 |
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| Protein GI | 156742900 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00290707 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATCGCA CTCCGCCCTT GTTCGTGTCG GTGTACGCAC TCCTTATCTG CGCGCTCTTC
GCCACCAATT GGAGCCTCGC CGCTTCGCCT TCGGAACATC GCCCGTCGGT ATCGATGACA
TTTGTATCCG GCGATACGCC TGTGCGGCTG GATGCACAGG TCGAGCCTGA CGCTACGGTT
GTCTGGCGGA ACAATGACAC CAGACCGCAC CGACTGCGAT CGGTCGATGG CAGTTGGACA
TCACCGGTGA TTGCGCCGGG GGATGTGCAG CGTCAGTGGT TTGCGCAGCC TGGACGTTAC
CCGTTTGTGT GCGACTTCGA TCAGGATATG CGCGGTGAAC TGACGGTTCA GTCCGGCGCT
TACCGCGTGT TTCTGCCGCT GGTGGCGCGT GGCATGCCCG CAGGACCATC CGGTGAGCGT
TGGTCGAACC CGGCGACGTG GGGTGGGCGC CTGCCGCAGG CGGGTGAGGC AGTGCGCATT
CCGCCGGGCA AAACCGTTCT CCTGGATGTC AGTCCGCCGC CTCTGCGCAG CCTGACGATT
GAGGGAAGCC TGGTGTTCGA CAACCGCGAT CTCGACCTGA GCGCCGGCTG GATTATGCTG
CATGGCAACG GGCGATTGCG CATTGGCGAT CCGGCGGCGC CGTTCCGCCA TCGCGCGACC
ATTACGCTGA CGGCGCCCGA TCCTGATGAG GACGTGATGG GCATGGGAAC GCGCGGTATT
CTGTTGATGG GTGGAACGTT CGAAGCCTAT GGCCTCGCGC CGGTTCCGGT CTGGACGACT
CTTGCCGATC ACGCCGACGC CGGAGCGACT CGGCTCACCC TGCGCGATGC CGTCAACTGG
CAGGCTGGCG ATCAGATTGT GGTTGCGCCG ACCGACTTCT ACGGCGTGGC TGAGACGGAG
CAGTTGACCG TTCAGACAGC GGACGGTCCT CAGGTCGATC TGTCCACACC GCTGCGACAA
GAGCGATGGG GACGGTTGCA GTACGTGAGT GCGGCAGGAA TGATCCTGAC GCCAACGACG
GACATCACCC CGCTTGCGCT CGATGAACGC GCAGAGGTGG GCAATCTATC GCGCCAGATC
GTCATTCAGG GAGCGGACGA TGCGCGCTGG CGCAATGAGC GCTTTGGCGC GCACATCATG
GTGATGAACC ATGCCGTGCT GCGTCTCGAC GGCGTCGAGT TGCGGCGCAT GGGGCAGGGT
GGGCGTTTGG GACGCTATCC GATCCATTTC CATCTGCTCT CGTATGCGCC CAATGGCGCA
CTGATCGGAG ACGCAACAGC GCAGACAGTG ACCAACTCGA GCATCTGGAA CTCCGCCAAT
CGCTGTATTG TTATTCACGG CACGAATGGC GTAACGGTGC GGAACAATAT TTGCTACGAC
ATCGCCGGGC ACGCAATCTT TCTGGAAGAC GCGGTCGAGC GCCGCAATCT GATAGAGCAC
AATCTGGTGT TGAAAGTACG TCAACCGCCA CAACCGCTGT TGCCAAGCGA CCGGATAATG
TTTCGCCGTG GACCGTCGGG TTTCTGGTTG ACGAACCCGG ATAACACCGT GCGCGGCAAT
GTCGCTGCTG ATGCTGCCGG TAATGGCTTC TGGCTGGCGT TCCCCGAAAA ACCGCTCGGA
GATAACCAGA ATGTTCCGAT TCGCCCGATA AATACCCTTT TGGGCATTTT TAGTCATAAT
GTCGCACATT CGAATAATCG CCCAGGAATC AATATCGACT TTGCGCCGAT TGATAATGCG
GGCAATACTG CCGAAACAAA ATACATCCCT ACCATTGATG GAGGACCTTT CAGGTATGAA
AACCGCATAC GATTCACGCT GAGCGATATT ACGACCTACA AGAACAATGA CAACGGATTG
TGGAACCGGG TTTCGTGGCC GAACTACGTT CGGTTTGTTT CAGCCGATAA TGCCGGCATG
TTCTTTGCCG GCGCCGGCGA CGATGGCAGA ATCATCGACT CGCTGATCAT TGGTACGAGC
CTGAATAATC GCAATCCGTC ACCAACGTCA TTCTCCGGCG ATCAACCGAA TACTGCGATT
GCCAGTTATC ATAGCACATT CGACATTTAT AACAATGTCG TCGTCAATTT CCCGCTGAGT
CCGAGAAATG ACCGCGCGAG CGGCGCGTTT GCCACCAACG ACTACTATAC CCGACCGGTT
GATCGCGGTC TGGTGCGCAA TCCCAATAAT CGGCTGATCA ACTCCCATCC GGGGCGTCGG
GTCATTTCGC CCAATCTGAA CACGCCGGTC GGCAACGCTG CGCTCGCCGG CGCGCTTTGG
GATCCGTATG GCTACTGGGG ACCGGCAGGT AACTATTGGG TGTACGATGT GCCATTTCTG
ACGGCCGGTC GCCCCTGTGC GCCGGTCGCA CCGGCCGGGC AGAACGGGCA GAGTTGTGTT
GGACCGTATT ATGGCGTCGC TGGTTTTCGT ATCGATGGAG GCGACCCGTT TAAGCCACGT
ATGCCACTGA CCGTTACCCG GCTCGATGAT GCGCTTCAAC CCATGGCACA ATGGATCGTG
GAGGAGGGGA GTGGCAGCGG ACGGAACACC TTCGGGATTA TGCCGTGGAT GCGGCATTTT
GCAGCCGTTC CTGGAGGACG CTATCTGATC GAGTTCCGTG ATGCTGCCAA CAGCCTGCCG
CCGCCATCGC ACGAAGTAAA ACTGGAGTTG ACAAATATGC ACTCTCCTGC CGATCAGGTC
ATCCTTGCCG TTCCGTTCAG TGGCAGCGTG ACGGCGCGCG CCTACCTGAC GACGCGGCAA
TCCTATGAGT ACGCTGCGCC GGGATCGCCT GATCGCCGCG ATCTGACGCC GGTCTCATCG
ATGGCGGCGC TGCTGGCGAC GGATAACAGT ATGTGGCAAG ATACGGTCAA TCAGCGTGTG
TGGGTTCACG TTCGCGGTGG GGTTCCATGG TCGGGAGGAG AGCCGACGAA TCCGCTCTCG
GACGCGGCGC TCTATCGGGA TACAATCCTG CGTATCGTTC GCTGA
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| Protein sequence | MHRTPPLFVS VYALLICALF ATNWSLAASP SEHRPSVSMT FVSGDTPVRL DAQVEPDATV
VWRNNDTRPH RLRSVDGSWT SPVIAPGDVQ RQWFAQPGRY PFVCDFDQDM RGELTVQSGA
YRVFLPLVAR GMPAGPSGER WSNPATWGGR LPQAGEAVRI PPGKTVLLDV SPPPLRSLTI
EGSLVFDNRD LDLSAGWIML HGNGRLRIGD PAAPFRHRAT ITLTAPDPDE DVMGMGTRGI
LLMGGTFEAY GLAPVPVWTT LADHADAGAT RLTLRDAVNW QAGDQIVVAP TDFYGVAETE
QLTVQTADGP QVDLSTPLRQ ERWGRLQYVS AAGMILTPTT DITPLALDER AEVGNLSRQI
VIQGADDARW RNERFGAHIM VMNHAVLRLD GVELRRMGQG GRLGRYPIHF HLLSYAPNGA
LIGDATAQTV TNSSIWNSAN RCIVIHGTNG VTVRNNICYD IAGHAIFLED AVERRNLIEH
NLVLKVRQPP QPLLPSDRIM FRRGPSGFWL TNPDNTVRGN VAADAAGNGF WLAFPEKPLG
DNQNVPIRPI NTLLGIFSHN VAHSNNRPGI NIDFAPIDNA GNTAETKYIP TIDGGPFRYE
NRIRFTLSDI TTYKNNDNGL WNRVSWPNYV RFVSADNAGM FFAGAGDDGR IIDSLIIGTS
LNNRNPSPTS FSGDQPNTAI ASYHSTFDIY NNVVVNFPLS PRNDRASGAF ATNDYYTRPV
DRGLVRNPNN RLINSHPGRR VISPNLNTPV GNAALAGALW DPYGYWGPAG NYWVYDVPFL
TAGRPCAPVA PAGQNGQSCV GPYYGVAGFR IDGGDPFKPR MPLTVTRLDD ALQPMAQWIV
EEGSGSGRNT FGIMPWMRHF AAVPGGRYLI EFRDAANSLP PPSHEVKLEL TNMHSPADQV
ILAVPFSGSV TARAYLTTRQ SYEYAAPGSP DRRDLTPVSS MAALLATDNS MWQDTVNQRV
WVHVRGGVPW SGGEPTNPLS DAALYRDTIL RIVR
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