| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2947 |
|---|
| Symbol | |
|---|
| ID | 5540437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 3823663 |
|---|
| End bp | 3824166 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640895067 |
|---|
| Product | glutathione peroxidase |
|---|
| Protein accession | YP_001433026 |
|---|
| Protein GI | 156742897 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0386] Glutathione peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.781382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0011995 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATAT ACGACATCAC CGCCAACCGC ATTGACGGCA CACCGCAGCC GCTCAGCGAC
TACCGGAACC GGGTGCTGCT GATCGTCAAC GTCGCCAGCA AATGTGGATT TGCGCCGCAG
TATGCCGGTC TCGAAACCCT CTACCGCCGC TACCGCGACG AAGGTTTTGT TGTGCTCGGA
TTCCCGTGCG ACCAGTTCGC CGGGCAGGAA TACGACGATC CGAACGCCAT CCAGCAGTTC
TGCACGCGCA ACTATGGGGT CAGTTTTCCG ATCTTTGAGA AGGTGGATGT CAACGGTCCG
AACACCCATC CATTGTTCGC GCTGCTGAAA GCGGAAAAGC CGGGATTGTT GGGCATCCAG
ACGATTCCGT GGAACTTCAC CAAGTTTCTG GTGGACCGCC AGGGGAAAGT GCGTCGCCGT
TACGCCCCCA CCGATACGCC GGAAAAGATC GAGCGCGACA TTGCTGCGCT GCTGCGCCAG
CCGACGGCGA TTACGGCTCA GTAA
|
|---|
| Protein sequence | MGIYDITANR IDGTPQPLSD YRNRVLLIVN VASKCGFAPQ YAGLETLYRR YRDEGFVVLG
FPCDQFAGQE YDDPNAIQQF CTRNYGVSFP IFEKVDVNGP NTHPLFALLK AEKPGLLGIQ
TIPWNFTKFL VDRQGKVRRR YAPTDTPEKI ERDIAALLRQ PTAITAQ
|
|---|
| |