| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2943 |
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| Symbol | |
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| ID | 5540433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3817609 |
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| End bp | 3818448 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895063 |
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| Product | hypothetical protein |
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| Protein accession | YP_001433022 |
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| Protein GI | 156742893 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0056563 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGACCTGA TAGGACTGTT ATGGATTTTC TTCATTATTT CGTCGTTACA GCCGGTCATT
CGCCAGAAGA TGCTGGAGAA CGGGCGCCTG CGCCTGCTCG AACGCCTCGA ACAGCAGCGC
CAGAGCCGGG TGATTGTCCT CATTCACCGC CAGGAAACGC TCAGTCTGCT CGGGTTCCCG
CTCGTGCGCT ATATCGACAT CGACGACTCG GAAGCGGTGC TGCGGGCGAT CAAAATGACC
GATAAGGATG TGCCGATTGA CCTGGTGCTG CACACCCCCG GCGGACTGGT TCTGGCGGCG
GAACAGATCG CCAGCGCGTT GCGCAAGCAT CCGGCGAAGG TCACCGTCTT CGTGCCGCAC
TACGCCATGT CTGGCGGGAC GCTCATCGCT CTGGCGGCGG ACGAGATTGT GATGGACGAG
AACGCGGTTC TCGGACCGGT AGACCCGCAG TTGGGGCAAC AGCCAGCGGC ATCGATTCTC
AAGGTGCTGG AACGCAAGCC GATCAGCGAG ATCGACGACG AGACCCTGAT CATGGCGGAC
ATTGCCGAAA AAGCCATCCG CCAGGTGAAG GCGACTGTCA TCGAGTTGCT GGCGGATCGT
ATCGGCGCCG AAAAAGCCGA ACATATCGCC ACAATGCTGG CAACTGGCGT CTGGACGCAC
GATTACCCGA TCAGCGTGCG CGAAGCGCGC GAACTCGGTT TGCCGGTCAG CACCGATATG
CCGTCGCTTG TGTACCAGTT GATGGGGCTG TACCCACAGA CGGCGCAGCG CCGCCCGTCG
GTTGAGTACA TTCCGCTCCC CCGCTCGCGC GAATCGGAGC GTCGCCGGGC AGAGCGATAG
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| Protein sequence | MDLIGLLWIF FIISSLQPVI RQKMLENGRL RLLERLEQQR QSRVIVLIHR QETLSLLGFP
LVRYIDIDDS EAVLRAIKMT DKDVPIDLVL HTPGGLVLAA EQIASALRKH PAKVTVFVPH
YAMSGGTLIA LAADEIVMDE NAVLGPVDPQ LGQQPAASIL KVLERKPISE IDDETLIMAD
IAEKAIRQVK ATVIELLADR IGAEKAEHIA TMLATGVWTH DYPISVREAR ELGLPVSTDM
PSLVYQLMGL YPQTAQRRPS VEYIPLPRSR ESERRRAER
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