Gene Rcas_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2938 
Symbol 
ID5540428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3813729 
End bp3814124 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content63% 
IMG OID640895058 
Productthioesterase superfamily protein 
Protein accessionYP_001433017 
Protein GI156742888 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00161 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0050577 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCTG CCGATCGCGT CGAGACGCGT ATGGTCTTTC CGGTGTTCCC CATGAACACC 
AACCACTACC GGACCCTCTT CGGCGGCACG GCGGTCGCCT GGATCGACCA GGCGGCGTTC
ATTTGCGCCA CGCGCTGGTG TCGGCGCAAG GTCGTGACGG TGCGGATCAG CGAGGTCAAC
TTCCACCACC CGGTGCGTGA AGGGTCGATT GTCGAGGTGA TCGCCCGTCT GGTCGGTACC
GGACGCAGTT CAATGCGTAT CGCTGTCGAT GTCTGGTGGG AGCCGATGGA CCACAACGAA
CGGGTGCTGG TGTGTCAGGC GGAATGCGTG CTCGTCGCCG TCGACGAGCA GAATCGTCCG
GTGACGGTGC CGCCGCTGAC GGAGACAATG TCATGA
 
Protein sequence
MSAADRVETR MVFPVFPMNT NHYRTLFGGT AVAWIDQAAF ICATRWCRRK VVTVRISEVN 
FHHPVREGSI VEVIARLVGT GRSSMRIAVD VWWEPMDHNE RVLVCQAECV LVAVDEQNRP
VTVPPLTETM S