| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2933 |
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| Symbol | |
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| ID | 5540423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3806277 |
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| End bp | 3807275 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895054 |
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| Product | quinone oxidoreductase putative YhdH/YhfP |
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| Protein accession | YP_001433013 |
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| Protein GI | 156742884 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0318941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACTC AGGACACGTT CAGAGCGCTG GTGCTGACCC AGGAAAACGG CGCGATCCAC
GCTGAGTTCC GCCAACTGAC GAACGACGAT CTGCCGCAGG GCGACACGCT GGTGCAGGTG
GTCTATTCCT GTCTCAACTA CAAGGATGGT CTGAATGTCA CTGGCAAGGG GAAGATTTCG
CGTTTCTTTC CGATGGTCCC CGGCATCGAT CTGGCAGGGA CGGTGATCGA AACAACCAGC
CCCGCGTATC ACCCTGGCGA TCCGGTGGTG TTGACCGGCT GGGGCATCGG CGAACGACAC
TGGGGTGGGT ACGCGCAGCG CGCGCGCGTC AAAGCCGAAT GGCTGGTTCC TTTGCCTGCG
GGAATGACTC TCTTCCATTC CATGGCCATT GGCACTGCCG GGTTTACGGC AATGCTGGCG
GTGATGGCGC TCGAAGAAGC TGGCGTTAAA CCTGGTGATC GTGACGTGCT GGTGACCGGT
GCAGCCGGCG GGGTCGGCAG CATCGCCACC ACTCTACTGG CGCGGCGCGG CTACCGTGTC
GCTGCGTCTA CCGGGCGCGC CGAAACCCAC GACTATCTGC GTGAACTCGG CGCGACAACC
ATTGTGCCCC GCGCCGAACT GGCAGCGCCG GGACGTCCGC TCGAATCAGA ACGCTGGGCA
GGCGCGGTCG ATACGGTCGG CGGCGATGTG CTGGCGCGCG TTCTCGCCGC CACTGCGACC
GGCGGCGCAG TTGCAGCATG CGGCAATGCC GGCGGCGCTC ATTTGACCAC CACGGTGTTT
CCGTTTATCC TGCGCGGCGT GCGTCTGATC GGCATTGATT CGGTCACCTG CCCAACGGAG
CGCCGCCGCG CGGCATGGGA TAATCTGGCG CGCGAGCTGC CTGCCGATGT GCTCGACCGG
ATGACCCGCG TCGAACCGCT CAGCCGGGTC AAAGAACTGT GCGATGAGAT CGTGGCCGGT
CAGGTGCGTG GGCGGGTTGT TTTCGATGTG AATGCCTAG
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| Protein sequence | MMTQDTFRAL VLTQENGAIH AEFRQLTNDD LPQGDTLVQV VYSCLNYKDG LNVTGKGKIS
RFFPMVPGID LAGTVIETTS PAYHPGDPVV LTGWGIGERH WGGYAQRARV KAEWLVPLPA
GMTLFHSMAI GTAGFTAMLA VMALEEAGVK PGDRDVLVTG AAGGVGSIAT TLLARRGYRV
AASTGRAETH DYLRELGATT IVPRAELAAP GRPLESERWA GAVDTVGGDV LARVLAATAT
GGAVAACGNA GGAHLTTTVF PFILRGVRLI GIDSVTCPTE RRRAAWDNLA RELPADVLDR
MTRVEPLSRV KELCDEIVAG QVRGRVVFDV NA
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