Gene Rcas_2927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2927 
Symbol 
ID5540417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3791235 
End bp3792221 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content61% 
IMG OID640895048 
Productacetyl-CoA carboxylase, carboxyl transferase, beta subunit 
Protein accessionYP_001433007 
Protein GI156742878 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0612519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.406969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTAT CCGTTTCTCA TGTGGTCAGG CGCTCCGGGG GTTATGCAGG GCGACCGCAC 
AGTCTGTGGC AAGGAGAGGA CTCGATGAAA GAGTTGATTC AACGATCGCG GAAGAGCTTC
ACCGTCGTGC ATCCGATCGA GTCGGACGTG CCGGACAACG TCTGGGTCAA GTGCCCGTCG
TGCCGGGAAT TGATCTACCA CAAGCAACTG GCTGAGCGCA TGAAGGTGTG TCGCTGCGGC
TACCACATGC GCCTGACAGC GCGTGAGTGG CTGGCGCTGC TCGATGAAGG TTCGTTCGTC
GAATACGACG CGCACCTGCG CCCCACCGAC CCGCTCGGCT TTGTGTCGCC CAAAGAAGCA
TATGCCGATA AACTGCGCGA AACGCAGCGT CGCACCGGTC TTGCTGATGT CGTGGTGAGC
GGCGTTGGCA GCATTGAAGG ATACCGACTG TCGATTGCAG TGTGCGATTT CAACTTCATC
GGCGGCTCGA TGGGCAGCGT CTTCGGCGAG AAGATGGCGC GCGCTGCGGA GCGCGCGGCG
ACGCTCGGCA TTCCGCTGCT CACGATCAAC ACCAGTGGCG GCGCGCGCAT GCAGGAAGGC
GTGATCGCGC TGATGCAACT GGCGAAAGTC AATATGGCGC TCACCCGTCT GGCGGCGGCG
CGTCAACCGC ATATCGCCGT ACTTGTCGAT CCATGCTATG GCGGCGTCAC TGCCTCCTAC
GCCTCAGTCG CCGACATTAT TATTGCCGAG CCGGGCGCCA ACATCGGCTT TGCCGGTCGC
CGTGTGATTG AACAGACGAT TCGCCAGAAA CTGCCGGCGG ATTTTCAGAC TGCCGAATTT
ATGCTCCAGC ACGGCATGGT CGATATGGTC ACACCGCGCA GCGAGTTGCA CGGTGTGCTG
GCAAAACTGC TGCGCCTCTA CGCCGCCGAA GGGCGCAGTG GAGCGTATTC CTCCGAAGCG
GTCGCACCGA CGCTGGCATC CATCTGA
 
Protein sequence
MLLSVSHVVR RSGGYAGRPH SLWQGEDSMK ELIQRSRKSF TVVHPIESDV PDNVWVKCPS 
CRELIYHKQL AERMKVCRCG YHMRLTAREW LALLDEGSFV EYDAHLRPTD PLGFVSPKEA
YADKLRETQR RTGLADVVVS GVGSIEGYRL SIAVCDFNFI GGSMGSVFGE KMARAAERAA
TLGIPLLTIN TSGGARMQEG VIALMQLAKV NMALTRLAAA RQPHIAVLVD PCYGGVTASY
ASVADIIIAE PGANIGFAGR RVIEQTIRQK LPADFQTAEF MLQHGMVDMV TPRSELHGVL
AKLLRLYAAE GRSGAYSSEA VAPTLASI