| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2920 |
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| Symbol | |
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| ID | 5540410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3782960 |
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| End bp | 3783673 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895041 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001433000 |
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| Protein GI | 156742871 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATCA TTCCTGCTAT TGATTTGAAG GACGGTCGCT GTGTGCGCCT CTACCAGGGC
GATTTCCAGC AGGTCACCGT CTATGGCGAT GATCCGGTTG CAATTGCGCA ACACTGGTTC
GAACAGGGGG CGCCACGCCT ACACCTTGTC GATCTCGATG GCGCGCGCAG CGGGCAGCCG
GTCCATACCG ACATCATACG CGCGATTGTG CGGTCTTTTG GCGCGCCGGT GCAACTGGGA
GGCGGGCTGC GCAGCATCGA AGCCGTCGAG CGTGCGCTGG AACTGGGAGT GCAACGCGTT
GTTCTGGGCA CGGCAGCCGT TGAACATCCC GACATGATCG CCCATCTGGT CGCGCAATTC
GGCGACGCTA TCGCTGTCGC AATTGATGCG CGCAACGGCA TGGCGGCGAC GGCTGGATGG
ACGGAGACCG CCGCCATGAG CGCCGTTGAT CTGCTCGAAC GCATGGTGAC GCTGGGGGTC
CGGCGCGTCA TTTATACCGA TATTTCGCGC GACGGCACCC TTTCTGAACC GAACATCGCG
GCAACCGGGG CGCTCGTGCG CCCCGATGGT CCTGCAATTA TTGCATCGGG AGGAATCAGC
ACACTTGATC ACTTGCGTCG CCTGGCAGAC GTTGGCGTTG AGGGTGCGAT TGTCGGACGA
GCGCTCTATA CCGGCGATCT GTCACTGCGT GAAGCGCTTG CAGCCTTCCA ATGA
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| Protein sequence | MEIIPAIDLK DGRCVRLYQG DFQQVTVYGD DPVAIAQHWF EQGAPRLHLV DLDGARSGQP
VHTDIIRAIV RSFGAPVQLG GGLRSIEAVE RALELGVQRV VLGTAAVEHP DMIAHLVAQF
GDAIAVAIDA RNGMAATAGW TETAAMSAVD LLERMVTLGV RRVIYTDISR DGTLSEPNIA
ATGALVRPDG PAIIASGGIS TLDHLRRLAD VGVEGAIVGR ALYTGDLSLR EALAAFQ
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