Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2902 |
Symbol | |
ID | 5540392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3762847 |
End bp | 3764721 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895023 |
Product | hypothetical protein |
Protein accession | YP_001432982 |
Protein GI | 156742853 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.779759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGTCG AAAAAGTGCA TCGATACCCG CGCCATTTTA CTGTTACCAT CGAAATATTG TCGGCCATCA CCGTTCTTCT TGCTACGGCG CTGCTGGGGC GCGACCTGCT GCGCCTGCTC TGGTCGACCT ATACCCTCGA CACTGCCCTG TTTGCCCGTT TTCCCTGGCT CACCGATCTG GTCCTGCTCA TTTCCGACGC CAATACGCCT CCGCCATCCG GTCTCGCGGA TCTGTTGCCT GCGCTCGGGT GGATGGCGTT GGCGCTGGCA ACCGCCCTTC TTCTTCGGAA CAGTATGCCG ACGGTACGCA CCAGTGCGCG CGGCATGCTG GTAGCGTTTG TCAACGACTG GCTGCCGGTA CCATGGGAAA ATATTCGCGC AATCAAAGTG ACCGAGTCCG GTGATCGCTA CGTGCTGCTG GTTGAAACCG ACCGCGGATG GCTTACCGGA TGGCATCGCT GGTACAGTTT CATCTATCGT CTTGGATTTC GCCCGGCGTT TCTGATTACG TCGCAGATCA GCGACTTTGA TGAACTGGTC AAGACGTTGC TGAGCGAAGC GGATCGCGCA GCGCGCACGC TGGCGACAGC ACGACGCATC AAATTGCAGG AAGACGCCAG TTCACCATTG TTCCGGCTTC TGCTCAGCCC GACGGCGTTT TTTACGCAAC GCGCGCCGCG AAGCGATGCA CCGCCTGCTG TGGCAGGCAT TTCCGGCGAT GTTGTGATTG GCCAGTATCC CCGACGTATC CGCGCAACAC TGACCTGGAC TGCGGCGCTC ATCGCCGGTG CGGCTATCCT GCGGTACCTG ACACTCGCGC TGACTTTCCT GGCGATTACT TTCCCCTGGG TGCGTTCGCT ACCGATCATC GATCAACTCG ATCTGCGATT GCTTCCCGCG CCCTGGTGGC TGCTCATCGA GGCGCACATT GTGCTCTTGT TCCTGATCGG CGTGGCATCG GTCATCTATC ATGCGCTGCC CACCGTAGAA GCGCGCAGTG AAGGGTTGAT CGTTCATCGA TGGCGCGGCA GGACGCTTGT GCCCTGGTCA CGCCTGCGGG TCATGAAGGT CACCGAGTTT TCGGAAACCA GCCAGATAGT GCTGATCCAG GTTGCCGGCG GATTGCCGCT GGATACCCGC TTCGTCAGTA TGGTGTACGA TGGCAGCCTG TCGCCGGGCA TTCTGATCAC CTCGGCGATC GGCAATGCCG ACGCATTGCT GCAACGCATC GCGCTGGAAG CCATGCGATA CCATGAGGCG ACCGACGATA CCGCGACAGC CCCGTTCCAG AGTGATGCTC GTTCGGACCT TTTGTTGTTA AGTGTGCAGT CGAGCAGGGC GGTCAACCAT CTGGTCGAAG AGTTGCGCAA CGATCCCGAT ACCCAGGGGT TCACCACCCG ACGATTCTTG CGCCTTCTGC CCACTGCCCT TGGGCTGGCC TCATTCCCTG CGCTGATATT GTTCGCCGAT CGTTCGTTCG TTCAGCATAT TCTCCCGGAT GGACGCCTGC TGGGAGCAAT GGTTGTGCTG CTGCTGCTGG CGCTGCTCGA ATGGCCGCTG GTGTCGCTTG CCGCCGTTGC ACTCGATGAG ATGAGCGGCA GCAGCGAGGA CGGCATGCGC CCCCTCTATC TCTATCCTCA GACTCAACAA CCGCGCCTGT TCCTCATGCT GGCTGCGCTG ATCGCCTTGC TGCTCGGCGC GCAACCGCTG GCGGCACTCC TCTGGTTGGG CGCCATCGGC TGGTCGTTCT GGCTGGCGGC AGGTTTGTGG AGCGCATTGT ACGACTGGCG CGGCGGGCAA TTGATCGGCG GAGGGTTGCT CCCGGTCGCC TTTCAGTTGC TTCTGCTGAT CGGGTACCTG GTGGTGCGGG TGTAG
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Protein sequence | MNVEKVHRYP RHFTVTIEIL SAITVLLATA LLGRDLLRLL WSTYTLDTAL FARFPWLTDL VLLISDANTP PPSGLADLLP ALGWMALALA TALLLRNSMP TVRTSARGML VAFVNDWLPV PWENIRAIKV TESGDRYVLL VETDRGWLTG WHRWYSFIYR LGFRPAFLIT SQISDFDELV KTLLSEADRA ARTLATARRI KLQEDASSPL FRLLLSPTAF FTQRAPRSDA PPAVAGISGD VVIGQYPRRI RATLTWTAAL IAGAAILRYL TLALTFLAIT FPWVRSLPII DQLDLRLLPA PWWLLIEAHI VLLFLIGVAS VIYHALPTVE ARSEGLIVHR WRGRTLVPWS RLRVMKVTEF SETSQIVLIQ VAGGLPLDTR FVSMVYDGSL SPGILITSAI GNADALLQRI ALEAMRYHEA TDDTATAPFQ SDARSDLLLL SVQSSRAVNH LVEELRNDPD TQGFTTRRFL RLLPTALGLA SFPALILFAD RSFVQHILPD GRLLGAMVVL LLLALLEWPL VSLAAVALDE MSGSSEDGMR PLYLYPQTQQ PRLFLMLAAL IALLLGAQPL AALLWLGAIG WSFWLAAGLW SALYDWRGGQ LIGGGLLPVA FQLLLLIGYL VVRV
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