| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2897 |
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| Symbol | |
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| ID | 5540387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3758833 |
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| End bp | 3759771 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640895018 |
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| Product | ROK family protein |
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| Protein accession | YP_001432977 |
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| Protein GI | 156742848 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCG TTATTGGTCT CGATTTTGGC GGCACAAAAC TTGCCGCCGG TCTCGTCGAT
CTGACGCATG GCGTAGTGCT GGCGCGCCGC ACCATACCGA CGCCGGTGGC TGCCGGCGCA
CCTGCCAGCC TGGATGCAAT GCTGGCAATG GCACGCGAAT TGATGGATTC GGCGCCAGCG
CCGGTTCAGG GCGTTGGCGT CAGTTTTGGC GGACCGGTAG CCGCCGATGG ACGCACGGTG
CGTTTCTCGA TGCACGTCGC CGGATGGGAA CAGATGCCGC TGGCGGCGCG CATCGAGGCT
TTGCTGGGAT TGCCTGCGGC AGTCGCAAAC GATGGCGATG CAGCGGCGCT CGCCGAGTTT
CACTTCGGCG CCGGGCGGGG CGTGCAGCAC CTTCTTTACC TGACGGTGAG CACCGGCATC
GGTGGCGGTA TCATCATTGG CGGGCGGTTA CATCGTGGCG AGCGCGCATG GGCGGGCGAA
GCGGGGCATC AGACGCTGAA GCCAGATGGA CCACCCTGCC CGTGTGGACG CAACGGATGC
CTGGAGGCGC TGGCATCGGG ATTGTCGATT GCGCGAGAGG CGCGCCTGCG GTTGCGTGGT
CCTGACGGTG CGTTCAGTGT GTTGGCGACT ATCCCGCCCG ATGCGCTGAC GGCGCAACAC
GTGGCGGAAG CCGCCGCCAG CGGCGACGCG CTGGCGCGCG CTGTGTGGAA CGAGGCAATG
GGCTGGCTAG GGATCGGTAT CGCTTCAGCC GCCAACCTGC TCAACCCTGG ACGGGTGGTG
CTCGGCGGCG GGTTGACCCG CGCTGGCGCC TTGCTGTTCG ATCCGGTGCG CCATGTGGTT
GCGCAGCGTG CTATGGACCC GGAATTGAGC ATCATGCCTG CGGCGCTCGG CGACGATGTC
GGCATTCTGG GGGGAGCGGC GCTGCTGCGC GAATCTTGA
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| Protein sequence | MNLVIGLDFG GTKLAAGLVD LTHGVVLARR TIPTPVAAGA PASLDAMLAM ARELMDSAPA
PVQGVGVSFG GPVAADGRTV RFSMHVAGWE QMPLAARIEA LLGLPAAVAN DGDAAALAEF
HFGAGRGVQH LLYLTVSTGI GGGIIIGGRL HRGERAWAGE AGHQTLKPDG PPCPCGRNGC
LEALASGLSI AREARLRLRG PDGAFSVLAT IPPDALTAQH VAEAAASGDA LARAVWNEAM
GWLGIGIASA ANLLNPGRVV LGGGLTRAGA LLFDPVRHVV AQRAMDPELS IMPAALGDDV
GILGGAALLR ES
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