| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2873 |
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| Symbol | |
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| ID | 5540362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3721198 |
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| End bp | 3723351 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640894993 |
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| Product | polymorphic outer membrane protein |
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| Protein accession | YP_001432953 |
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| Protein GI | 156742824 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.406525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA TTCTCTTCCG TCTTTTTTCT GTTTGCTCGA TCCTGGCGGC GCTGCTTGCA
GCGCAGCGCG CCCACCCGGC CTATGCGGCG AGCTACGTCG TCAACTCGCT GGCGGACAAC
ACCACCAACG ACGCCTTCTG CACCCTGCGC GAAGCGATCC TGGCAGCGAA CGACGCGGCT
GCCAATGATT GCGGCGCAGG CAGCGGCGGC GACGACACCA TCACCTTCAG CGTGAGCGGG
ACGATTGTGC TTGGCTCGAC CCTGCCCGCC ATCGTCTCCG GGCAGGGCAA GCTGACCATT
GACGGCGGGG GCGGCATCAC CGTCAGCGGG AACAACAGCG TGCGGGTGAT GGTCGTCAAC
AGCGGCGCCG ACCTCACCCT GCGCAACATC ACCATCGCCA ACGGATCGAT CGGCGGCTTC
GGCGGCGGCA TCTACAACAA CGGCGGCACG CTGACGGTCA TCAACAGCAC CTTCTCCGCC
AACAGCGCCT CCGGCCCCTG GGGCGGCGGC GGCGGCATCT ACAACGCCAG CGGCGGCACG
CTGACGGTGA CCAACAGCAC CTTCTCGGGC AACAGCGCCA GCGGCCCCTT CGGCGGCGGC
GGCATCTTCA ACGCCGGCAC GCTGACGGTG ACCAACAGCA CCTTCTCCGC CAACAGCGCC
GGCTTCGGCG GCGGCATCTA CAACGGCGGC ACGCTGACGG TGACCAACAG CACCTTCTCC
AACAACAGCG CCAGCGGCAC AGGCGGCGGC ATCTTCAACG ATGGCGGCGC CACGCTGACG
CTCAAGAACA CCATCATCGC CAACAGCACC AGCGGCGGGG ATTGCATAAA TGCCGGAACG
GTAGACACCA CCAACTCGAT CAACAACCTC ATCAAAGACA CCGGGGCCAA CGCCTGCGGC
CTGACGCACG GCACGAACGG CAACATCATC GGCTCCGACC CCGACCTGGG CGCGCTGACC
GGCTCGCCGG CCTACTTCCC GCTGCTGCCC GGCAGCCCGG CCATTGACAA AGGCGATAAC
GCCACCTGCG CCGCCGCGCC GGTTAATAAC CAGTCGCAAA ACGGCGTGAC GCGCCCGCAG
GATGGAGACG GCAACAACAC AGCGGTCTGC GACATCGGCT CCTACGAACG CACCCTTCAG
CCTGCCGCCT ATGTGGTCAA CACGCTGAAC GACAATGTGA CAGCCGGCGA CGGCCAGTGC
AGCCTGCGCG AAGCGATCCT GGCGGCGAAC AACGACTCTG CCTACAACAG CCTGAGCGGT
TGCGGGGCTG CCAGCAGCCT GGACGACACC ATCACCTTCA GCGTGAGCGG GACGATTGTG
CTTGGTTCGA CCCTGCCTGC CATCGTCAGC GGGCAGGGCA CGTTGACCAT TGACGGCGGG
GGCAGCATCA CCGTCAGCGG GAACAACAGC GTGCGGGTGA TGGTCGTCAA CAGCGGCGCC
GACCTCACCC TGCGCAACAT CACCATCGCC AACGGATCGA GCGGCGGCTT CGGCGGCGGC
ATCTACAACA ACGGTGGCAC GCTGACGGTT GAGAGCAGCA CCTTCTCCGC CAACAGCGCC
GGCTTCGGCG GCGGCATCTT CAACGCCAGC GGCGGCACGC TGACGGTGAC CAACAGCACC
TTCTCCAACA ACAGCGCCAC CTTAGGCGGC TTCGGCGGCG GCATCTTCAA CGCCGGCACG
CTGACGGTGA CCAACAGCAC CTTCTCGGGC AACAGCGCCA GCGGCATAGG CGGCGGCATC
TTCAACGATG GCGGCGGCAC GCTGACGCTC AAGAACACCA TCATCGCCAA CAGCACCAGC
GGCGGGGATT GCATAAATGC CGGAACTGTC ACCACCGACT CGATCAACAA CCTCATCGAA
GGCACCGGGG GCAATGCCTG CGGCCTGACG AACGGCACGA ACGGCAACAT CATCGGCTCC
GACCCCAACC TGGGCGCGCT GACCGGCTCC CCGGCCTACT ACCCTCTCAA CGTGGGCAGC
CCGGCCATTG ACGCCGGTGA CAACGCCACC TGCGCCGCCA TGCCGGTCAA CAACCAATCC
CAAAACGGCG TGACCCGCCC GGTGGATGGC GATATGAACG GGGTGGCGGT CTGCGACATT
GGCGCGTATG AACGGCCACT CGTCAAAGTC TACCTGCCCC TGATTGCGCG GTGA
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| Protein sequence | MSNILFRLFS VCSILAALLA AQRAHPAYAA SYVVNSLADN TTNDAFCTLR EAILAANDAA
ANDCGAGSGG DDTITFSVSG TIVLGSTLPA IVSGQGKLTI DGGGGITVSG NNSVRVMVVN
SGADLTLRNI TIANGSIGGF GGGIYNNGGT LTVINSTFSA NSASGPWGGG GGIYNASGGT
LTVTNSTFSG NSASGPFGGG GIFNAGTLTV TNSTFSANSA GFGGGIYNGG TLTVTNSTFS
NNSASGTGGG IFNDGGATLT LKNTIIANST SGGDCINAGT VDTTNSINNL IKDTGANACG
LTHGTNGNII GSDPDLGALT GSPAYFPLLP GSPAIDKGDN ATCAAAPVNN QSQNGVTRPQ
DGDGNNTAVC DIGSYERTLQ PAAYVVNTLN DNVTAGDGQC SLREAILAAN NDSAYNSLSG
CGAASSLDDT ITFSVSGTIV LGSTLPAIVS GQGTLTIDGG GSITVSGNNS VRVMVVNSGA
DLTLRNITIA NGSSGGFGGG IYNNGGTLTV ESSTFSANSA GFGGGIFNAS GGTLTVTNST
FSNNSATLGG FGGGIFNAGT LTVTNSTFSG NSASGIGGGI FNDGGGTLTL KNTIIANSTS
GGDCINAGTV TTDSINNLIE GTGGNACGLT NGTNGNIIGS DPNLGALTGS PAYYPLNVGS
PAIDAGDNAT CAAMPVNNQS QNGVTRPVDG DMNGVAVCDI GAYERPLVKV YLPLIAR
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