| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2860 |
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| Symbol | |
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| ID | 5540349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3712168 |
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| End bp | 3713601 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894987 |
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| Product | amidase |
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| Protein accession | YP_001432947 |
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| Protein GI | 156742818 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC TGCACAATCT CTGTTTTCTG ACCGCCGTTG AGCTGATGCA ACGGATCCGC
ACCCACGAGG TGTCGTGCGT TGAGGTAATG GAAGCGCACC TGCGCCAGAT CGAACGCACA
AATCCGCAGG TCAATGCGAT CATTACCCTG CTGCCGGAGC AGGCGCTCGA ACGGGCGCGC
GCCGCCGATA CCGCCCTGCA TCGCGGCGAT GAAGTCGGTC CCTTGCACGG GCTGCCGGTG
GCGCACAAGG ACCTGGTGCA GACGAAAGGC GTGCGCACGA CCTTCGGCTC ACCGATCTAT
GCCGATTTTG TTCCCGATGT CGATGACCTG ATTGTGATTC GTCTGCGCAA GGCAGGCGCG
ATCATGATCG GTAAGACCAA CACACCTGAG TTTGGCGCCG GTTCTCAGAC ATTCAACCCG
ATCTTTGGCG CAACCCGCAA TCCCTACGAC CTCTCGAAGA CCTGCGGCGG CAGCAGTGGC
GGCGCAGCCG TCGCCCTGGC GTGCGGCATG ATCCCGATTG CCGATGGCAG CGATACCGGC
GGTTCGCTAC GCAACCCGGC GAGTTTCTGC AATGTGGTCG GCTTCCGTCC GTCGCCGGGG
CGCGTGCCAT CCTGCTCAGA TCGCGCCGCC TGGCAAACCC TCAGTGTGCT GGGTCCGATG
GCGCGCACCG TTGCAGACAC TGCGCTGATG CTCAGCGCAA TTGCGGGACC ACATCCCTGC
TCACCGATTG CGCTCCAGAA ACCGGGGGCG CACTTTCGGC AGCCGCTCGA ACGCGACTTC
CGCGGCGTGC GGGTGGCGTG GAGCCGTACC CTCGGTGGAT TGCCTGTTGA TCCGCAGGTG
ACCGCCGTGC TCGAAGAGGC GCGTCCGGCG CTCGAAGCAA TTGGCTGCAT CGTCGAGGAG
GTCGAGCCGG ATTTCAGCGG CGCTGACGAA GCGTTCAGGG TATGGCGCGC ATGGAGTTAT
GAACAAAGCC TGGGCGAACT CGCCGACACG CACCGTGACC GTCTCAAGGA AACGATTCTT
GGGGAGATCG AACGGGGACG TGCGCTGACA GGACCGCAGA TCGGATACGC CGAACGGTTG
CGTACCGCGC TCTACCATCG GATGCGCAGA TTCATGAAAA CTTACGAATT CCTGGCGTTG
CCAACCGTCC AGGTTCCGCC ATTTCCTGTC GAGCAGCCGT ATGTGACGGA GATCAGCGGC
GTCCCGATGG AAACCTACAT CGACTGGATG CGGTCGTGTT ATTTTATTTC AATCACCAGC
CTCCCGGCGA TTTCCGTTCC TGCCGGATTC ACGCGCGACG GCTTGCCGGT AGGGTTGCAA
CTGGTCGGGC GCTACCGCAA CGACTTCGGC GTGCTGCAAC TGGCGCATGC CTTCGAGCAG
GCGACCGGTC ACTGGCGGCG ACGCCCGCCG ATTGTTGAAA TGGGACACGG ATGA
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| Protein sequence | MTDLHNLCFL TAVELMQRIR THEVSCVEVM EAHLRQIERT NPQVNAIITL LPEQALERAR
AADTALHRGD EVGPLHGLPV AHKDLVQTKG VRTTFGSPIY ADFVPDVDDL IVIRLRKAGA
IMIGKTNTPE FGAGSQTFNP IFGATRNPYD LSKTCGGSSG GAAVALACGM IPIADGSDTG
GSLRNPASFC NVVGFRPSPG RVPSCSDRAA WQTLSVLGPM ARTVADTALM LSAIAGPHPC
SPIALQKPGA HFRQPLERDF RGVRVAWSRT LGGLPVDPQV TAVLEEARPA LEAIGCIVEE
VEPDFSGADE AFRVWRAWSY EQSLGELADT HRDRLKETIL GEIERGRALT GPQIGYAERL
RTALYHRMRR FMKTYEFLAL PTVQVPPFPV EQPYVTEISG VPMETYIDWM RSCYFISITS
LPAISVPAGF TRDGLPVGLQ LVGRYRNDFG VLQLAHAFEQ ATGHWRRRPP IVEMGHG
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