Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2848 |
Symbol | |
ID | 5540337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3693873 |
End bp | 3694718 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640894977 |
Product | gluconolactonase |
Protein accession | YP_001432937 |
Protein GI | 156742808 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGA AGCACCTGAT CGAACCGGGC GATCCTGAAC GCATTGCCGG CGGCTTTGAG TTCACCGAAG GTCCGGTCTG GCATCCCGAT GGCTTCCTGA TTTTCTCAGA CATCCCTGCA AACCGCCAAT ACCGCTGGCA TCCCACCGAA GGCGTCTCCG TGTGGCGTGA GCCAAGCGGC AACTCGAATG GTCTCACACT CGACCGGCAG GGGTATATCA TCGCCTGCGA ACACGGTGGC CGGCGCGTCT CCCGCGCCAA ACCCGGCGCC GAACCGGTGA CCCTGGCGGA TCGGTACGAC GGAAAACGTC TCAACAGCCC GAACGATGTT GTGGTGAAGT CGGATGGGAC GATCTATTTT ACCGATCCAC CCTACGGCAT TGCGCCTGAA GATCGCGAGC AACCATGCAA TGGCGTGTAT CGCATATTGC CGGACGGCAG CATCGAACTG CTCGTTGATG ACTTCGACCG TCCTAATGGG TTGGCGTTTT CGCCTGATGA GACGATACTG TACATTGATG ACTCGCCACG TCGCCACGTG CGGGCGTTCG ATGTGTTGCC CGACGGGCGC CTGGCAAATT CACGCATCTT CGCCGACATG GATCACCCGC AGCCCGGTTC TCCCGATGGC ATGAAAGTTG ATCGTGAAGG GAATCTGTAC GTCACCGGCG CAACCGGGGT CTGGGTCTTC GAGCCAGATG GGACGTTGCT GGGTGTCATC GTGACCCCTG AGCGCCCGGC GAACTGCGCC TGGGGCGACA CCGATCGGCA GACTCTCTAT ATCACGGCAC GCACATCGCT TTACCGCGTT CGCACGCGGG TGCCTGGCAT ACCGGTTCCG CGCTGA
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Protein sequence | MKLKHLIEPG DPERIAGGFE FTEGPVWHPD GFLIFSDIPA NRQYRWHPTE GVSVWREPSG NSNGLTLDRQ GYIIACEHGG RRVSRAKPGA EPVTLADRYD GKRLNSPNDV VVKSDGTIYF TDPPYGIAPE DREQPCNGVY RILPDGSIEL LVDDFDRPNG LAFSPDETIL YIDDSPRRHV RAFDVLPDGR LANSRIFADM DHPQPGSPDG MKVDREGNLY VTGATGVWVF EPDGTLLGVI VTPERPANCA WGDTDRQTLY ITARTSLYRV RTRVPGIPVP R
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