Gene Rcas_2848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2848 
Symbol 
ID5540337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3693873 
End bp3694718 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content60% 
IMG OID640894977 
Productgluconolactonase 
Protein accessionYP_001432937 
Protein GI156742808 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGA AGCACCTGAT CGAACCGGGC GATCCTGAAC GCATTGCCGG CGGCTTTGAG 
TTCACCGAAG GTCCGGTCTG GCATCCCGAT GGCTTCCTGA TTTTCTCAGA CATCCCTGCA
AACCGCCAAT ACCGCTGGCA TCCCACCGAA GGCGTCTCCG TGTGGCGTGA GCCAAGCGGC
AACTCGAATG GTCTCACACT CGACCGGCAG GGGTATATCA TCGCCTGCGA ACACGGTGGC
CGGCGCGTCT CCCGCGCCAA ACCCGGCGCC GAACCGGTGA CCCTGGCGGA TCGGTACGAC
GGAAAACGTC TCAACAGCCC GAACGATGTT GTGGTGAAGT CGGATGGGAC GATCTATTTT
ACCGATCCAC CCTACGGCAT TGCGCCTGAA GATCGCGAGC AACCATGCAA TGGCGTGTAT
CGCATATTGC CGGACGGCAG CATCGAACTG CTCGTTGATG ACTTCGACCG TCCTAATGGG
TTGGCGTTTT CGCCTGATGA GACGATACTG TACATTGATG ACTCGCCACG TCGCCACGTG
CGGGCGTTCG ATGTGTTGCC CGACGGGCGC CTGGCAAATT CACGCATCTT CGCCGACATG
GATCACCCGC AGCCCGGTTC TCCCGATGGC ATGAAAGTTG ATCGTGAAGG GAATCTGTAC
GTCACCGGCG CAACCGGGGT CTGGGTCTTC GAGCCAGATG GGACGTTGCT GGGTGTCATC
GTGACCCCTG AGCGCCCGGC GAACTGCGCC TGGGGCGACA CCGATCGGCA GACTCTCTAT
ATCACGGCAC GCACATCGCT TTACCGCGTT CGCACGCGGG TGCCTGGCAT ACCGGTTCCG
CGCTGA
 
Protein sequence
MKLKHLIEPG DPERIAGGFE FTEGPVWHPD GFLIFSDIPA NRQYRWHPTE GVSVWREPSG 
NSNGLTLDRQ GYIIACEHGG RRVSRAKPGA EPVTLADRYD GKRLNSPNDV VVKSDGTIYF
TDPPYGIAPE DREQPCNGVY RILPDGSIEL LVDDFDRPNG LAFSPDETIL YIDDSPRRHV
RAFDVLPDGR LANSRIFADM DHPQPGSPDG MKVDREGNLY VTGATGVWVF EPDGTLLGVI
VTPERPANCA WGDTDRQTLY ITARTSLYRV RTRVPGIPVP R