Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2845 |
Symbol | |
ID | 5540334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3688502 |
End bp | 3690181 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640894974 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_001432934 |
Protein GI | 156742805 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.493421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATG CCAACAAGAT TATCTATTCC ATGATCCGGG TCGGCAAAGT TGTACCGCCG AACCGACCGG TGCTGAAGGA TATTTCGCTC TCCTACTTCT ATGGCGCCAA AATCGGCGTT ATCGGACTCA ACGGTTCCGG CAAATCGACC CTGTTACGCA TTATGGCGGG TGTGGACCAC GATTTCTTCG GCGAAACCGT CATCGCTCCG GGGTACACCA TCGGTTTTCT GGAACAGGAA CCGCGCCTCG ACGACACGCT CACCGTCCGC CAAACGGTCG AGCAGGGGGT GCAGCAGATT GTCGATCTGT TGCGGCGCTA CGATGACATC AACGAACGAT TCAGCGATCC GGACGCCAAT GTGGACGCGC TGATCGCCGA GCAGTCGGCA TTGCAGGAGC AACTCGACCA TCTTGACGCT TGGGACCTCG ACAGTCGCCT GGAACTGGCG ATGGATGCGC TGCGCTGTCC GCCGGGCGAT ACACCGGTTG CCGTGCTGTC GGGCGGTGAA CGACGGCGTG TTGCCCTCTG CCGTCTGCTG CTGCAAAAGC CGGATATCCT GCTCCTCGAC GAGCCGACCA ACCATCTCGA CGCCGAGTCG GTCGCATGGC TCGAACGGCA CCTGCAAGAC TATCCGGGCA CGGTGGTCTG CGTGACGCAT GATCGCCGGT TTCTGAACAA TGTCGCCGAG TGGATCCTGG AACTGGATCG CGGGATGGGT GTTCCCTGGC GCGGCAACTA CGCATCGTGG CTGGCGCAGA AACAACAGCA GATCGCCGCC GCTGAAAAAG CCGAAAGTCA GCGGCAGAAA ACCCTGACGC GCGAACTGGA GTGGATCAAC ACAGCGCCGC GCGCCCGTCA GACGAAGAGC AAGGCGCGCA TCGCCGCCTA TGAGCAACTC CTCAGCCAGA GCGCCGAACG CGCCGAGCGC GACCTGGAAA TCTACATCCC ACCCGGTCCG CGTCTCGGCG ACCTGGTGAT CCGTGCTGAG CACGTGACGA AGGCATATGG CGACACATTC CTCTACGATG ACCTGACCTT CGATGTGCCG CCGGGCGCGA TTGTCGGTGT GATCGGACCA AACGGCGCCG GCAAAACGAC CCTCTTCCGC ATGATCACCG GTCAGGAACA GCCAGATAGC GGACGGCTAA TCGTCGGTCC GTCGGTGAAG TTAGGATATG TCGATCAGAG CCGCGCAACG CTGAACCCGG ATCGCACCGT CTGGGAAGAA ATCTCTGGCG GCGATGACGT CATGTTGCTC GGCAATCGTC AGGTCAACTC GCGATCCTAC GTTGCGCGCT TCAATTTCAC CGGCGCCGAT CAGCAGAAGA AGGTCGGAAC CCTCTCCGGC GGTGAGCGCA ACCGGGTGCA TCTGGCAAAG GTGTTGCGTT CGGGCGCGAA TGTGTTACTA CTCGACGAAC CAACCAACGA TCTCGACGTC CATACCCTGC GCGCGCTCGA AGACGCACTG ATCAACTTCG CCGGGTGCGC GCTGATTATC TCCCACGACC GCTGGTTTCT TGATCGGGTG GCGACCCACA TCCTGGCATT CGAGAATGAG TCGAGCGTAC TCTGGTTTCC TGGAACCTAC AGTGAATATG AAGAAGACCG CCGCCGTCGC CTTGGCAAGG CAGCCGATCA ACCGCACCGC GCGGTATATC GCCGTCTGAC GCGCGGGTGA
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Protein sequence | MTDANKIIYS MIRVGKVVPP NRPVLKDISL SYFYGAKIGV IGLNGSGKST LLRIMAGVDH DFFGETVIAP GYTIGFLEQE PRLDDTLTVR QTVEQGVQQI VDLLRRYDDI NERFSDPDAN VDALIAEQSA LQEQLDHLDA WDLDSRLELA MDALRCPPGD TPVAVLSGGE RRRVALCRLL LQKPDILLLD EPTNHLDAES VAWLERHLQD YPGTVVCVTH DRRFLNNVAE WILELDRGMG VPWRGNYASW LAQKQQQIAA AEKAESQRQK TLTRELEWIN TAPRARQTKS KARIAAYEQL LSQSAERAER DLEIYIPPGP RLGDLVIRAE HVTKAYGDTF LYDDLTFDVP PGAIVGVIGP NGAGKTTLFR MITGQEQPDS GRLIVGPSVK LGYVDQSRAT LNPDRTVWEE ISGGDDVMLL GNRQVNSRSY VARFNFTGAD QQKKVGTLSG GERNRVHLAK VLRSGANVLL LDEPTNDLDV HTLRALEDAL INFAGCALII SHDRWFLDRV ATHILAFENE SSVLWFPGTY SEYEEDRRRR LGKAADQPHR AVYRRLTRG
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