Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2844 |
Symbol | |
ID | 5540333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3686985 |
End bp | 3688271 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640894973 |
Product | CBS domain-containing protein |
Protein accession | YP_001432933 |
Protein GI | 156742804 |
COG category | [S] Function unknown [T] Signal transduction mechanisms |
COG ID | [COG1993] Uncharacterized conserved protein [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCTGA GTGGTCATGC ACAGCAGGTC TGGATTTTTC TGGGCGAAAG CGATCAGTGG CACGGACGTC CGCTCTCGTT GGCGCTCCTC GAAATGCTCA AACGCAACGG CATCGCCGGC GGCACCGTCC TGCGCGGTAT TGCCGGGTAT GGCGCGCACA GTTTCATTCA CACAACGTCG CTCGTCGAAC TGAGCAGCGA CCTGCCCGTT ATCGTAACGT TCGTGGATCG CCCTGATCGT GTGGCGCGGG TCATGCCCGA AATCATGAGC ATGGTGCGCG AAGGGCTGAT CACCACGATA CCGGTCGAAG TGCTCAAATA CACCTCGCGT GCCGTTGGTC CCTTCCCAGC GCACCTGACC GTCGCCGACA TTATGAGCCG CCAGGTAGTC AGTGTGCGTC CCGATACGCC GATTGCCGTG ATCGTCGAGT TGTTGATCGA CCGCGCTCTG CGATCGGCGC CGGTTGTCGA TGCAGAGAAT CGCGTCGTAG GCATCATCAC CGACGGCGAC CTCCTCACCC GTGGCGCCAC CGAACTGCCG CTGGCATTGC AGCGCGAACT GTCGTTGGCG GAGCGCGCCG CCGCAGTCGA AATACTGGCG GAACGTCCAC ATACCGCCGC CGACCTGATG ACTCCTGATC CGGTGACGCT ACCGATGACA ACGCCCCTGG CGGAAGCAGC GGCAATTATG GCGGATCGTG GCTTGAAGCG CATCCCGGTA GTCGATGAGC AGCATCGACT GGTCGGCATG GTCAGTCGCT ATGATCTCCT GTCTACGGTC GCTGAAGGGC TGCGCCAGCG TCCTGCAGAA CCGGTCGTGC CATCCGGCGG CGCGCCACAG ACCGTTGGCG ACATCATGAT GACCGGCATT CCGACGGTGC GCCCGGATAC GCCGCTGGCG GAAACCCTCG ACCACCTGCT CGAAACCGAC AAACGCCGCG TTGTCGTCGT CGATGAACAT CACCACGTCG TCGGAATCAT CAGCGATGGC GACGTATTGC GGCGCGCGGC GAAGCGGGTG CGTTCCGGCG CACTGCGCGC CCTGGCTGCC TGGTTTGGCG GCGGCGCCCG CCCGCCGGGT CTCGAAGTTG CAGCCGAAGG ACGCACCGCC GCCGATGTGA TGACCAGTCC GGTGGTGACG CTGCCAGCCG ACGCGCCAAT CACGGAAGCC GTCCGGTTGA TGATGACGCA TAAGATCAAG CGCATCCCGG TCGTTGACGC CGACAAACGG TTCGTTGGCA TGGTCGGGCG GGCAGGGGTG CTGGCGGCGT TGAGCCGGAG AACATGA
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Protein sequence | MDLSGHAQQV WIFLGESDQW HGRPLSLALL EMLKRNGIAG GTVLRGIAGY GAHSFIHTTS LVELSSDLPV IVTFVDRPDR VARVMPEIMS MVREGLITTI PVEVLKYTSR AVGPFPAHLT VADIMSRQVV SVRPDTPIAV IVELLIDRAL RSAPVVDAEN RVVGIITDGD LLTRGATELP LALQRELSLA ERAAAVEILA ERPHTAADLM TPDPVTLPMT TPLAEAAAIM ADRGLKRIPV VDEQHRLVGM VSRYDLLSTV AEGLRQRPAE PVVPSGGAPQ TVGDIMMTGI PTVRPDTPLA ETLDHLLETD KRRVVVVDEH HHVVGIISDG DVLRRAAKRV RSGALRALAA WFGGGARPPG LEVAAEGRTA ADVMTSPVVT LPADAPITEA VRLMMTHKIK RIPVVDADKR FVGMVGRAGV LAALSRRT
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