| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2839 |
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| Symbol | |
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| ID | 5540328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3680335 |
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| End bp | 3681243 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894968 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001432928 |
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| Protein GI | 156742799 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.14972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCTG ATACGCTTGC GTCTGACTCT CAACCACGCG AAGGGCAGAT TGCCGCTCTT
CTCCGCCGTA GCGAACGATT GCAACTCGGC TTGCTCCTCT TCCCCGGTCT CTTCTGGTTG
GTGACGTTCT TCGCCCTGCC GCTCGTGGTC GTTGTGCTCT ACAGTTTTGC GACCAACGGA
CCCGGCGGGC GCATCGAGTG GACCTTCACG CTCAACAACT ACCGCACCCT ATTCACGGAA
AGTCTGTACG TTAACGCCTA CTGGCGCTCG ATCTGGGCAG GTGTGTGGAC GACGCTCATC
TGTCTGGCGC TCGGTTATCC GCTGGCATAC TCCATTGTTC GTCGTCCGCC ACGCTGGCGC
ACCGTACTGC TGTTTCTGAT ATTGATTCCG TTCTGGACGA ACTTTCTGGT GCGCACCTAT
GCCTGGATGC TCATTCTTTC GAATAACGGC ATCATCAACA GCGCCATTCA GTCGCTGGGA
TTGCCGCGCG TCGCGCTCTA TCCGTCCGAA GGCGCGGTGC TGATTGGGCT GATCTATGGC
AGCCTGCCAT TTATGGTGCT GCCGATCTAC GCATCGCTGG CGCGCTTCGA CTTCACTCTG
ATGGAAGCGG CGGCAGACCT GGGCGCCGAT CAGGTGCGCG CATTTCTGCG GGTAATGCTG
CCGCTGACGA TGCCGGGAGT GGCCGCCGGG TCGGTGCTGG TCTTCATTCC GACGGTGGGG
CAGTTCGTAG TGTCCGATCT GCTTGGCGGG GCGAAGGTCG ATTACCTTGG AAATCTGCTG
CAACGCCTGT TTACTCGCTC AAACCCGCCG AACTGGCCGC TCGGATCGGC TATGGCGATT
GTTTTCATGA TTGTGCTGAC GGTGGCGATT ATCATTTATT TTCGGGTGAC GACGGAGGAG
GACCGTTAA
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| Protein sequence | MAADTLASDS QPREGQIAAL LRRSERLQLG LLLFPGLFWL VTFFALPLVV VVLYSFATNG
PGGRIEWTFT LNNYRTLFTE SLYVNAYWRS IWAGVWTTLI CLALGYPLAY SIVRRPPRWR
TVLLFLILIP FWTNFLVRTY AWMLILSNNG IINSAIQSLG LPRVALYPSE GAVLIGLIYG
SLPFMVLPIY ASLARFDFTL MEAAADLGAD QVRAFLRVML PLTMPGVAAG SVLVFIPTVG
QFVVSDLLGG AKVDYLGNLL QRLFTRSNPP NWPLGSAMAI VFMIVLTVAI IIYFRVTTEE
DR
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