| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2827 |
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| Symbol | |
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| ID | 5540314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3664724 |
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| End bp | 3666616 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894954 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_001432916 |
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| Protein GI | 156742787 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.789654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCA GGCAGACATT CCAGTTCAGA CGCTTCGAGC GAACCGCCAA CCACGTCAGT
GCGCGGCGTG AATCGCAGTC TGATCACAGC GCAGAGCAGG GTCAATTTCG CCATGCGTTT
CATCAGGCGT TTCCTGGCGA GGCGGACCAG CCGCCGCCGG CGGAGTCGGA GACGGGGCAA
GAGCAGCCGC AAAGTGGAGC GCCGCTCGAT AGCGCAGTCC AGCGCATATT GGCTGGAGAT
CGGCGTGTGC ATCGGACAAT CCATCAGGCG ATCAGTGCGA TCAAGGCGCG CTGCCCTGAT
CAGAGGCGTC CTGCACAGCG TATGTCCGTG TCGGAAGGCG ATGTCGTCGC TGACGTTTCG
CCTGCTGTCG AGTCGGACAT CGATGCGATG CACGGCGGCG GTGCGCCGCT CGACCGGGAG
ACGCGCGCGT TTATGGAGCC GCGCTTCGGG CACGATTTCA GCCAGGTGCA CATTCATGCC
GATGCGCGCG CCGCAACCGT GGCGCGGTCG CTCGATGCGC TGGCGTTCAC CGTCGGGAAC
GACATCGCTT TCGCGCCGGG GCAGTATCAG CCGGGCAGCG ACGAGGGGCG CGCGCTGCTG
GCGCACGAAT TGACCCACAT CATCCAGCAG ACCGGCGGCG CGGCGCGGGT GCAGCGGCAG
GAGGCAGGTG AAGGCGAAGA GGAACATAGC GGCGTTGGTG ATGAGGTGCA ACCGCCGGTG
ACGCTGACCA ATCCACGGTT TGCGCCCATT CCTGCGCTGC GTGACATTGG GGAAGGACGA
CGCACGCTCT CGACGCGCGA TAACGGTAGA CCGGTAAAGG CTGTGCAAAC GGCGCTCCTC
GATCTGGGAT ACTCGCTGCT GCGGTTTCAC GATGATGGTC GGCTTGGCAA CGAAACGCGC
GATGCGGTGC GTCAGTTTCG CGCCGACCGG CATCTTGCGC CAGGAGTGGA CGTCGATTAT
ACCGTGATCG CCGTGCTGGA CCGTGTGGCG CCGCCCCCTG GACGGGCGAC TGAGCATTTC
GTTGATTACG AACGGTTGCT GGCGGATGAT CGTCTCGATT TTTCGATATC GCTTGGCTAT
GACGAAGGGC AGAGCCATGT CAGCGATGCC GAGTCTGCCA GGCGATGGCT CGAAGGACAG
GGATTCACGC TCAGCGCTGG CTCTCCCGCC GAAGGTGATG AGCGGTACGA AATGCGTCGA
GATATCACGT ATCCCAATGC TCAAGGGGAG CGGGTGACGA AGAATGTGCT GGTGACATTG
CGCCTCATCA CGCCGGGAGA AGGAGCGGCG CGTCGTTTTC TCGAAACACT GAATGAAACA
GAGATCATGA CCTATGTGGG ACATGCGCGC GGCGGTCTGG GACCAGATTT CGACGACAAG
CACAGCGCCC GTGAAAATGT CGTCATCGGC GCGCACTCTC GCCTGCACGA CCAACCGAAT
ACCAGCGTGC GCACGCCGCG CGATCCCTAC TGGCGGGAGA TCAACAGCGA GCGAACCAAT
ACGCTGGAGG AAATGACGGA TCGCGGCGCC TGGGATGAGC AACGCTATCG GGTCTGGCTC
TTTTATGCCT GTACGTCGCT CAACTATCAG GACGAGCTGC GCGGCGGGTT GCTGCCGCCA
AGCATGAACC GTGAGAATCT TGATATTTTC GGTACGAACA AAGCGGTGCC GATTGCTGCC
GGTCTAGAGC CAACCTTCGC AATGATCGAA GGCATCCTCA ACGCGCAAAC GATGGAGCAG
ATTGTTCGCG CTATGCAGCA GCGCATGGAA GATGCGCTGC GCGCATACCC GAATTTGACG
TCGCCTCAGT TGCGCGCTGC ATTACGCGAG TACAGCAACG CATTCTACCG CGAAGGCGCT
GCGGATAACC CGACAGCGCC GGCGGTTGAA TAA
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| Protein sequence | MTSRQTFQFR RFERTANHVS ARRESQSDHS AEQGQFRHAF HQAFPGEADQ PPPAESETGQ
EQPQSGAPLD SAVQRILAGD RRVHRTIHQA ISAIKARCPD QRRPAQRMSV SEGDVVADVS
PAVESDIDAM HGGGAPLDRE TRAFMEPRFG HDFSQVHIHA DARAATVARS LDALAFTVGN
DIAFAPGQYQ PGSDEGRALL AHELTHIIQQ TGGAARVQRQ EAGEGEEEHS GVGDEVQPPV
TLTNPRFAPI PALRDIGEGR RTLSTRDNGR PVKAVQTALL DLGYSLLRFH DDGRLGNETR
DAVRQFRADR HLAPGVDVDY TVIAVLDRVA PPPGRATEHF VDYERLLADD RLDFSISLGY
DEGQSHVSDA ESARRWLEGQ GFTLSAGSPA EGDERYEMRR DITYPNAQGE RVTKNVLVTL
RLITPGEGAA RRFLETLNET EIMTYVGHAR GGLGPDFDDK HSARENVVIG AHSRLHDQPN
TSVRTPRDPY WREINSERTN TLEEMTDRGA WDEQRYRVWL FYACTSLNYQ DELRGGLLPP
SMNRENLDIF GTNKAVPIAA GLEPTFAMIE GILNAQTMEQ IVRAMQQRME DALRAYPNLT
SPQLRAALRE YSNAFYREGA ADNPTAPAVE
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