Gene Rcas_2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2816 
Symbol 
ID5540303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3652551 
End bp3652841 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content67% 
IMG OID640894943 
ProductPAAR repeat-containing protein 
Protein accessionYP_001432905 
Protein GI156742776 
COG category[S] Function unknown 
COG ID[COG4104] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCTG CCGCGCGCGT GAGCGATATG CATACCTGCC CGCTGTCCGA TGGTCCAAAG 
CCGCATGTTG GTGGTCCGAT CATGCCGCCT GGCGTGCCGA CGGTGCTGAT CGGCGGGTTG
CCGGCGGCGG TGGTCGGCGG TATGGCGACG TGCGCCGGTC CGCCGGATAC GATTATCAAA
GGCAGCGCAA CGGTGCTGAT CGGCGGCATG CCGGCGGCGC GCATGGGTGA TCAGACGGCG
CATGGCGGCG TGATTGTCGG GGGATTTCCA CAGGTTGACA TTGGCGGGTG A
 
Protein sequence
MPPAARVSDM HTCPLSDGPK PHVGGPIMPP GVPTVLIGGL PAAVVGGMAT CAGPPDTIIK 
GSATVLIGGM PAARMGDQTA HGGVIVGGFP QVDIGG