| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2801 |
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| Symbol | |
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| ID | 5540288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3622821 |
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| End bp | 3623744 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640894928 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001432890 |
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| Protein GI | 156742761 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTCGCGT ATGTCGTCCA GCGGTTGGCG GGGCTGGCGT TTGTGTTCAT TCTGGTATCG
ATTGTGGCGT TTTTGCTGAT GCACGCTACC CCAGGCGGAC CATTCGACGA GCCGAACATG
CCGTTGCCGC CGGCTGCTAA AGAAAATATC CTGCGCAAAT ATGGCCTTGA TCAGCCGCTG
CACATTCAGT ACATCAGGTA TATGACGAAT GCGTTGCGCG GCGACTTCGG GTACTCATTC
TCCAGTCCCA CCGAAACCGT CGCCCAGGTC ATTGGGCGCA CCTGGCCCAT CAGCATCACT
CTCGGCGGCA TTACCGTCGT CGTGGCGCTC GGCAGCGGCA TTCTGCTCGG CATTCTGGCC
GCAATACGGC AGAATAGTAT TCTGGATTAT GTGGTCACAT TCATTGCCAC GCTTGGATTG
ACCGTGCCCA ACTTCGTTAT TGCGCTATGG TTGATCCTGA TTTTTGCGGT TGAACTGGGG
TGGTTGCCGC TTGGTGGGTG GGGAGAGGAT TGGCGGCAGA TTATTATGCC GATGATCGCT
CTGGGTTTGG GTCCCATGGG TATTGCCACC CGCTATACTC GCGCCAGCCT GGTTGATGTC
TTCACGGCAG ACTATATTCG GACGGCGCGC GCCAAAGGGC TGGCGGAGCG CATGGTGGTA
ATGCGCCATG CGATTAAGAA TGCGCTTATT CCGATTATCA CGGTGCTCGG TCCACGCATT
CCCGACCTGA TTACCGGGAC GATCTTTGTC GAAACCATGT TCCGTGTGCC GGGGCTGGGC
AAGTTTTTCG TCGAAAGCGT GCTCGACCGT GATTATCCGA TGATTATGGC GTTGATGTTG
TTGATCGCGG TACTGTGGGG ATTTGTCTAT CTCATCACCG ATCTGCTCTA CACGATTATT
GATCCGCGCG TCAAACTGAC GTAG
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| Protein sequence | MVAYVVQRLA GLAFVFILVS IVAFLLMHAT PGGPFDEPNM PLPPAAKENI LRKYGLDQPL
HIQYIRYMTN ALRGDFGYSF SSPTETVAQV IGRTWPISIT LGGITVVVAL GSGILLGILA
AIRQNSILDY VVTFIATLGL TVPNFVIALW LILIFAVELG WLPLGGWGED WRQIIMPMIA
LGLGPMGIAT RYTRASLVDV FTADYIRTAR AKGLAERMVV MRHAIKNALI PIITVLGPRI
PDLITGTIFV ETMFRVPGLG KFFVESVLDR DYPMIMALML LIAVLWGFVY LITDLLYTII
DPRVKLT
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