Gene Rcas_2768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2768 
Symbol 
ID5540254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3582921 
End bp3584006 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content59% 
IMG OID640894894 
Producthypothetical protein 
Protein accessionYP_001432857 
Protein GI156742728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.580688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCGT TCAACGGTCT GGGCATGCAC CTGGGCAATC TGGCGCGCCT GTCGCAGGCG 
CGGACTCGCT CGATCAGTCC GGAGAACTTC ACCGGCGAAA AGGGTCAAGG CGGAATGGCG
ACCGATGGAA CTGGCGCGGC ATGCGCCCGC GATCTGGGGA TCGGCTGGAA AATTTCGCCA
TCGATCCGCA TTGCGCCCGG CGAAACGCGA ACCCTTGCCG ATGTGCGGGG GTCGGGTGCG
ATTCAGCATA TCTGGATGAC GCTGACCGGT CACTGGCGCC ACAGTATTCT GCGCATCTAT
TGGGACGACC AGGACACGCC ATCGGTCGAA TGCCCGGCGG GCGACTTCTT TGCCTGCGGT
TGGGGACAGT ACGCGCAGAT CAGTTCGCTG GCAGTGTGCG TGAACCCTGG CAGTGCGTTC
AATTGTTACT GGGAGATGCC CTACCGCAAA GGGTTTCGCA TAACGATGAC GAATATCGCC
GCCCAAGAAA TGACGCTCTA CTACCAGATC ACGTTTACCG AAACTGATGT GTCCGACGAT
GTGGCATACT TCCACGCACA GTTCCGGCGC GTCAACCCGT TGCCCTACAA ACAGGTCTAC
ACCATCCTCG ACGGTGTGCG CGGGCAGGGG CAATACGTCG GCACGTATCT GGCGTGGGGA
GTCAACAACA ACGGTTGGTG GGGCGAAGGC GAGATCAAGT TCTACCTCGA CGGTGACGAC
GAATACCCAA CGATTTGCGG CACCGGCACG GAAGACTACT TTTGCGGTTC GTACAATTTC
GATGTTGGCA AAGAGCACGG CGGCTACCGC GAATTTACGA CCCCCTACTC CGGGCTGGCG
CAGGTCATCC GCCCCGATGG TCTTTATCGC TCGCAGATGC GCTTCAGCAT GTACCGCTGG
CATATTACCG ATCCCATCCG TTTCGCGCGC GATCTGCGGG TGACGATTCA GGCGCTTGGC
TGGCGCAGCG GCGGACGGTA TCTGCCGTTG CAGGATGATA TTGCATCGGT GGCATACTGG
TATCAGACGT TGCCGACAGC GCCATTCCCT CCACTTCCCG ATGCGGATTA CCTTGAGGTG
ATATAA
 
Protein sequence
MTSFNGLGMH LGNLARLSQA RTRSISPENF TGEKGQGGMA TDGTGAACAR DLGIGWKISP 
SIRIAPGETR TLADVRGSGA IQHIWMTLTG HWRHSILRIY WDDQDTPSVE CPAGDFFACG
WGQYAQISSL AVCVNPGSAF NCYWEMPYRK GFRITMTNIA AQEMTLYYQI TFTETDVSDD
VAYFHAQFRR VNPLPYKQVY TILDGVRGQG QYVGTYLAWG VNNNGWWGEG EIKFYLDGDD
EYPTICGTGT EDYFCGSYNF DVGKEHGGYR EFTTPYSGLA QVIRPDGLYR SQMRFSMYRW
HITDPIRFAR DLRVTIQALG WRSGGRYLPL QDDIASVAYW YQTLPTAPFP PLPDADYLEV
I