| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2765 |
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| Symbol | |
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| ID | 5540251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3577692 |
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| End bp | 3578351 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894891 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_001432854 |
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| Protein GI | 156742725 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.361393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCACAT TCGACATCCA CGCTGCGATG GCGATTTTGC GCGCCGAGAT GCCGCGTTTC
CCCAAGCCGC TGATCGATGG CATGGGGGAG GAAGAGGCAA ACAACCCGTT TCGCATCCTG
ATCGCCACCA TCCTCAGCCT GCGCACCAAG GACACGATGA CCGCCGTGGT CGCGCCACGC
CTGTTCGCGG TCGCCGACTC ACCGGAGAAG ATGCTGGCGC TCAGCGAAGA AGAGATCGCC
GAACTGATCT ATCCGGTTGG GTTCTATCGC AACAAGGCGC GAACGATCCG TGCTATCTGT
CGGCGCCTGA TCGAGGAGCA CGGCGGCAAG GTTCCCGCCG ATCTCGATGC GCTCCTGGCG
TTGCCCGGCG TTGGGCGAAA AACCGCTAAC CTGGTGCTCA CCGCCGGTTT CGATCTACCG
GGGATTTGCG TCGATACCCA CGTTCACCGC ATCTGCAACC GCTGGGGCTA TGTGCAGACC
AGAACGCCAG AAGAAACCGA GATGAAACTG CGCGAGATTT TGCCCTTCGA GTACTGGAAG
GAAATCAACG GGCTGCTTGT CACCCTGGGG CAGAATATCT GTCACCCGAC CTCGCCGCGT
TGCAGCGCCT GCCCGCTAGC GCACCTTTGC GCGCGGGTCG GAGTGGAACG CAGCCGCTGA
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| Protein sequence | MTTFDIHAAM AILRAEMPRF PKPLIDGMGE EEANNPFRIL IATILSLRTK DTMTAVVAPR
LFAVADSPEK MLALSEEEIA ELIYPVGFYR NKARTIRAIC RRLIEEHGGK VPADLDALLA
LPGVGRKTAN LVLTAGFDLP GICVDTHVHR ICNRWGYVQT RTPEETEMKL REILPFEYWK
EINGLLVTLG QNICHPTSPR CSACPLAHLC ARVGVERSR
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