| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2763 |
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| Symbol | |
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| ID | 5540249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3575977 |
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| End bp | 3577197 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894889 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001432852 |
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| Protein GI | 156742723 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.785331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTCC GTATGCAACA GGCGACGACA CTTGATCCAG CCTATGCCGG ACGCTTCGGT
CCCTACGGCG GGGCATACAT TCCCGAAACA CTGGCGCCAG CGGTTGCGGC GCTCGAACAG
GCATATGCCA ACGCCCGTCA GGATCCGGAG TTCTGGGCGG AACTCGACCG GTTGCACCGC
AGTTATACCG GCAGACCCAC GCCGCTGACT TTTGCGCAGC GGCTGACAGA GCACCTTGGC
GGCGCACAGA TCTACCTCAA GCGCGAGGAC CTGGCGCACA CCGGCGCGCA CAAGATCAAC
AATGCGCTCG GACAGGGACT GTTGGCGAAG CGCATGGGGA AAACGCGGAT CATCGCTGAA
ACCGGCGCCG GGCAGCACGG CGTCGCAACC GCCACTGTCT GCGCGTTGCT CGGCATGGAG
TGCGTGGTGT ACATGGGCGT CGATGATATG GCGCGCCAGC AACCGAATGT CTTCCGTATG
CGATTGCTCG GCGCAGAGGT GCGTGGGGTT GCCAGCGGAT CACGGACACT CAAAGATGCG
ATCAACGAAG CCATGCGCGA CTGGGTGACG AACCCGGACT CGTACTATCT CCTCGGCTCG
GCGCTTGGTC CGCATCCCTA CCCGACGATG GTGCGCGACT TTCAGAGCGT GATCGGACGT
GAGGCGCGCG AGCAGATGCT GGCATTAACC GGGCGCTTGC CCGATGTGGT GCTGGCATGC
GTCGGCGGCG GCTCGAATGC TATTGGCATC TTCCATGCGT TCCTCGACGA TGCCGAGGTG
GCATTGCGTG GCGTTGAGGC TGGCGGGCGC GGCATCACGC CAGGCGACCA CGCGGCGCGC
TTTGCGGGGG GGCGTCCGGG CGTCCTTCAA GGAACATACA CCTATGTGCT ACAAAACGAT
GACGGGCAGA TCGGGTTAAC CCATAGCGTC TCGGCCGGTC TCGACTATGC CGCGATTGGA
CCGGAACATG CCCTGCTCCA CGATCAGGGG CGCGCAACCT ACACGGTTGC CGACGATGAA
GAGGCGCTCG ATGCGTTTCA GACGCTGGCG CGGCTCGAAG GAATCATTCC GGCGCTCGAA
AGCGCGCACG CGGTTGCCGA AGCGATCAAA CTCGCGCCGA CCATGCGCCC CGATCAGATC
ATCCTGATCA ACCTTTCGGG GCGCGGTGAC AAGGACATTT TTACCGTGGC GAAGGTGTTG
GGGGTGGACG TTGCACATTG A
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| Protein sequence | MIFRMQQATT LDPAYAGRFG PYGGAYIPET LAPAVAALEQ AYANARQDPE FWAELDRLHR
SYTGRPTPLT FAQRLTEHLG GAQIYLKRED LAHTGAHKIN NALGQGLLAK RMGKTRIIAE
TGAGQHGVAT ATVCALLGME CVVYMGVDDM ARQQPNVFRM RLLGAEVRGV ASGSRTLKDA
INEAMRDWVT NPDSYYLLGS ALGPHPYPTM VRDFQSVIGR EAREQMLALT GRLPDVVLAC
VGGGSNAIGI FHAFLDDAEV ALRGVEAGGR GITPGDHAAR FAGGRPGVLQ GTYTYVLQND
DGQIGLTHSV SAGLDYAAIG PEHALLHDQG RATYTVADDE EALDAFQTLA RLEGIIPALE
SAHAVAEAIK LAPTMRPDQI ILINLSGRGD KDIFTVAKVL GVDVAH
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