Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2730 |
Symbol | |
ID | 5540216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3529338 |
End bp | 3533627 |
Gene Length | 4290 bp |
Protein Length | 1429 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640894856 |
Product | TPR repeat-containing adenylate/guanylate cyclase |
Protein accession | YP_001432819 |
Protein GI | 156742690 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.225426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCTGC ATCAAAAGGC AGATGCTGTG CCTGATTCGA CAGACATTCG GATGGTGGCG CCCGAACGAC TGGCGCGCTA TCTGCCGGTC GATCTCTCGG ATCATCTGCG TCACACCTCC GGTGTGGTTG ACATTCCTGC GGTCAGGCAT CACCTGGCAG CCGTGCGCAC CGTCATTGCG ACGTACCTGC CTCGGCGGGT CGCCCGATGG GCGCTGCGCG AACGTCGCGC ACCTCCCTGG CTGGAGTGGG TGGAAGGGTC GCTGCTCTTC GCCGACCTGT CCGGTTCGAC GGCGCTGGCG GAACGTCTGA GCGTACTCGG GCGCGAGGGA ACAGAACTCG TCACCGATTT CCTCAACAGT ATCTTTGCGC GCATGATCGA TATCATTTAT GCGTATGGCG GCGATCTGAT CTCGTTCGGC GGCGATGCGC TTCTGGTCTT GTTCGATGGC GCCGATCACC CCCGAACCGC TGTGTGCGCG GCGCTCGGAT TGCAGCAGGC GCTCGACGGC TATGTGCGCC ATGTCGCGGG AGTGGGCGAT TTTCCGATGC ACCTGCACGT TGGCGTCGAG AGTGGGCAGG TTGCCCTGAT GAGCGCCGGT CATGCCGATA CCTGGCACTA TGCGGCGCTT GGCGCGGTGG TGAACGGTGT CGCGCATGCC GAGGCGCTTG CCGGACCGGG GGAGATCGTG CTTGGGCGCC GCACCCGTGA ATTGCTCTCT GATATTGTCG GAGAACCGCT TCAGGATGGA TGCTTTCGTC TCCGCGCCAT TGCCGCTCCC ATCGCGCCGT CTGGTCTTGA ACCGGTCTAT CCGCGCGATG AGATGCCTGA TGAGACGCTG ACCGATCTGC TCGCCGATCT GGAACGCATC AGCCCGTACA TCCCTTCCGC GTTACTGAGT CGCATTATTG CCGTTCCAGA CAAACCGCAG GTCGAAGCCG ACTTGCGCCC GGTCACGGCA GTTTTTGCGC AGGTCGTTGG GCTTGAAGCG CTTGCGGAAG CATTGCCGCC GGTGCAATCG GCGCGTATCT TCGAGCGGTA TATGATCGCC ATGCAATCGG CAATTGCGCA CTACGGCGGG GTGATCAATA AACTGGACGT TGCCGAAGAA GGGGTGAAAC TGCTGGCAAT CTTCGGCGCG CCGACGGCGT ATGAGGATCA TCCCGAACGA GGCGCGCGCG CTGCGCTGGC GATGCAATCT GCCCTGCAAG AGGTGAATGC AGATGTTGAA GCGCATCTGC ACGGCGCCGA CGATCCCGGC GCGCGCCCAG CGCTGCCTGC GGTCTTGCTC CTTCGCCAGC GGATCGGGTT GAACCCCGGC GTTGTCTTTG CCGGCAATGT CGGCAGCGCC AACCGCAAAG AATACACGGT GATGGGTGAT GCAGTGAATA TTGCAGCGCG GGTCATGAGC GCGGCGCCCT GGGGCGATAT CTGGTGCGGT CGGGCGCTCG CTAAGGCAAC AGTGCGCATC GTATGCCAAC CCCAGGGGGT CATACCGCTC AAAGGGAAAT CGGAACCGCT CGAAATCTGT CGCATCGTCG GTGAACGCGA GACCGGCGAA GCCACGTTAT TGATGCAGGA CGCGCTGCCG CCTCTGGTTA ATCGCGCATA TGAGATGGCG TGGTTGGGCG AGAAACTTGC AACAGCGCTC ACCAGCTCAG GTCAGGCAGT GCGGCTTGTC GGTGAGGCAG GCGTTGGGAA AAGCCGATTG CTCGCAGCGT TGATCGATTT GGCGCGTGAG CATGGCATGC GCATCGTGTC GGCAGCGTGT CTTTCCTACA CTGCAAGCAT TCCATACGCC GCGTGGGGTG AGCTGCTGAA GTCACTCTGT GGCATGGTCG CCGGCGAGAG TAGCGAGGTT CGCGCGGGGA AAATCGCTGC CCATCTGGCA GCGCTCGGTG CGGGCATGGA GGAATGGTTG CCATTGCTGG GCGATCTGGT GCGCCTCGAT ATTCCCGATA ACCGGTTGAC TCGCGGTCTC GATCCGCAAC TGCGGCAGGA GCGTCGGTTT GATCTCCTCG AACGTCTGCT GTTGCACGCT GCAACGGAGA GTCCGTTGCT GGTCGTCTTT GAGGATTTGC ATTGGGCAGA CTCGGTCTCG CTCGAACTCT GGCGTCGTGT CGTTCAGGCG ATCCGCACCC ATCCGATTTT GTTGCTCGGC GCCCACCGAC CAACCGGCGC CTTTCTGAAT GACGATCAGG CTGCGGTGCT CGAAGTTCAG GAACTTCCGG CGGACGATAG CGATCGATTG GTGACGATCC TGTCGGGCGA TGTGCAGTTG CCCGAAACGC TGCGTCGTCA GATCGCGGCG CGAGCGGCGG GCAACCCGCT CTTCCTGGCG GAGTTGCTGC GCGCGGTGCT GGCACAGTCG AACCAGCCGC TGCTTCATAG TATCGATAAC CTGCCCGACA GTCTGAACGG TCTGCTCCTG GCGCGTATTG ATCGTCTCGA TGAGCATACA CGCAATGTGC TGCGCGTGGC TTCAGTCATC GGGCAGCGGA TTCCATTCGG AGTGTTGCAT GCGATCCAGA ACATCGACCG TGTTGCGTTG CTGCGCCAGT TGACCCATCT GGACGAGCAA GAAATTACGA TGCTCGAGCG GCTCGAGCCA GAACGGGTGC ATATGTTCCG CCATGCCCTG CTCCAGGAAG TGGCATACCA GAGCATGCTC TATGCGCGCC GGCGCGAGTT GCACGGTCGG ATCGGTGAGT ACCTGGAACA GCGCTACGGC GACGATCTGG ATGATTATTA CGGTTTGCTG GCGCATCATT ACCGCCTGAG CAACCGACGC GACAAGGCGA TCCACTATTT ACTGAAAGCC GGTCATGCCG CGCGCGCCGT CTTTGCCAAC GAAGAGGCGT TGCAATACTA TGCCTGGGCG CTCGATGCGC TGGCAGGCGA TGAACACGAT CCACGCCGCT GGGAAACGCA CCTGTCCATT GCGGATGTCG AAGCGACGCT CGGTCGATAT GACCGGGCGC TTGAACATAT CGCGCGCGTG CTCGAAGCGC CCGGCATTTC GCCGAATGTG GCGCAGCAGG CATACCATCG GCGCGGCGCC GTGCTCGAAA AGCAGGGAGG GTATGCTGCT GCGCTCGATG CACTCGAACA GGCGATGAGG ATTGTGCGCG CGCATCCGGC AGACGTGTCG CCACTGGCGG CGGCGCGTAT CAGCGCCGAT ATTGCGCTCG TCCGCAGGCG GCGTGGTGAG TACGACCTGG CACTGGCGGC ATGTGAAGAA GGACTGGCAA TGCTGCGGTC TGATTCCCAG AGCGCTGAAG ATGAAAAGAT CGAGGCGCGG CTACATGCCG AGAGCGGGTC GGTATTGACC TTGCGTGGCG AATATGCGCG CGCCCGCGAA TTCTTCGAGC GTAGTCTCCG GGTGCGGGAG GCGATTGATG ATCTGCCGGG CATGATCGCA TCGCACAACA ACATCGGTTA TCTCTGGCAG TTGCAAAATG ATCATCAGCG CGCGCTCGAA CACTATCGCG TGGCTGAGAC GCTGGCGCGC AAGATCGGTT TGCGCTATGC GATTACCTAT GCCCTGGGAA ATATCGCCTA CTCGTTGACG GTGCTCGGTC ACTACACCGA AGCCGAAGCG CACTGCCGGG ACGCGCTCGA CCTCTCGCGC CAGCTCAATG CGCAACTGGA AACGGCGCAG TTGCTCAACA CCCTTGGCAT TATCTATTAT CGCCGCGGCG ACTATGCGCA GGCGCAGCAG ATCTATCAGG AGGCGCTCGA CCTGCACCGC GCGTTGGGCA GCACCGACCA GGAGGCGAAT GTCCTGGTGC ATCTCGCCCA GACGTACAGC GCACAAGACG ACTATGCACG CGCGGCGGAC CTTGCGCGCC AGGCGCTGGC GACGGCTGAG GCGCTTCAGG CGCCGTCGCT TCAGGCCGAG GCGCTCAATG CGCTGGTCGA GGCAATGATT GGACGGGGAG ACGTGGAGGA TGCGGCGGTC TATGCGGACC GGGCGGTTGA GGTGAGCCGC ACTCTTGGCG CCGATGATCT CATGGCGATT GCGCTGCGGT TGCGTGGCGC CACGACTGTG GCGCAGGGAC GCTCCTGGCA GGAGGACTTT ACGGCCAGCG CAGCGCTGTG CGAAGCAGTG CAGGATCGCT TCGAACTGGC GCGCACCTGG AGCGCCTATG GCGCGGCGTT GCTGAAGGTG GGCAACCTGG ACGAGGGAAT CGTGTATCTA AAACGAGCCT ATGATACGTT TACTGTATTG AGCGCCAGCG GGGAAGCAAA CCGCATGCAC GCGGCGTATC GTGATATGCT CGCAGCGTAG
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Protein sequence | MVLHQKADAV PDSTDIRMVA PERLARYLPV DLSDHLRHTS GVVDIPAVRH HLAAVRTVIA TYLPRRVARW ALRERRAPPW LEWVEGSLLF ADLSGSTALA ERLSVLGREG TELVTDFLNS IFARMIDIIY AYGGDLISFG GDALLVLFDG ADHPRTAVCA ALGLQQALDG YVRHVAGVGD FPMHLHVGVE SGQVALMSAG HADTWHYAAL GAVVNGVAHA EALAGPGEIV LGRRTRELLS DIVGEPLQDG CFRLRAIAAP IAPSGLEPVY PRDEMPDETL TDLLADLERI SPYIPSALLS RIIAVPDKPQ VEADLRPVTA VFAQVVGLEA LAEALPPVQS ARIFERYMIA MQSAIAHYGG VINKLDVAEE GVKLLAIFGA PTAYEDHPER GARAALAMQS ALQEVNADVE AHLHGADDPG ARPALPAVLL LRQRIGLNPG VVFAGNVGSA NRKEYTVMGD AVNIAARVMS AAPWGDIWCG RALAKATVRI VCQPQGVIPL KGKSEPLEIC RIVGERETGE ATLLMQDALP PLVNRAYEMA WLGEKLATAL TSSGQAVRLV GEAGVGKSRL LAALIDLARE HGMRIVSAAC LSYTASIPYA AWGELLKSLC GMVAGESSEV RAGKIAAHLA ALGAGMEEWL PLLGDLVRLD IPDNRLTRGL DPQLRQERRF DLLERLLLHA ATESPLLVVF EDLHWADSVS LELWRRVVQA IRTHPILLLG AHRPTGAFLN DDQAAVLEVQ ELPADDSDRL VTILSGDVQL PETLRRQIAA RAAGNPLFLA ELLRAVLAQS NQPLLHSIDN LPDSLNGLLL ARIDRLDEHT RNVLRVASVI GQRIPFGVLH AIQNIDRVAL LRQLTHLDEQ EITMLERLEP ERVHMFRHAL LQEVAYQSML YARRRELHGR IGEYLEQRYG DDLDDYYGLL AHHYRLSNRR DKAIHYLLKA GHAARAVFAN EEALQYYAWA LDALAGDEHD PRRWETHLSI ADVEATLGRY DRALEHIARV LEAPGISPNV AQQAYHRRGA VLEKQGGYAA ALDALEQAMR IVRAHPADVS PLAAARISAD IALVRRRRGE YDLALAACEE GLAMLRSDSQ SAEDEKIEAR LHAESGSVLT LRGEYARARE FFERSLRVRE AIDDLPGMIA SHNNIGYLWQ LQNDHQRALE HYRVAETLAR KIGLRYAITY ALGNIAYSLT VLGHYTEAEA HCRDALDLSR QLNAQLETAQ LLNTLGIIYY RRGDYAQAQQ IYQEALDLHR ALGSTDQEAN VLVHLAQTYS AQDDYARAAD LARQALATAE ALQAPSLQAE ALNALVEAMI GRGDVEDAAV YADRAVEVSR TLGADDLMAI ALRLRGATTV AQGRSWQEDF TASAALCEAV QDRFELARTW SAYGAALLKV GNLDEGIVYL KRAYDTFTVL SASGEANRMH AAYRDMLAA
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