Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2724 |
Symbol | |
ID | 5540210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 3518263 |
End bp | 3520746 |
Gene Length | 2484 bp |
Protein Length | 827 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640894850 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001432813 |
Protein GI | 156742684 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGT CGGAACAGTC TCAGGATCGG CTGCATGAAC CATCATCACT GACCACACTG ATCACCCTGC TGTTGGGGTT TGCCCTGATC CTCGCCATTG TCAGCACGGG AATCTGCTTC ATCAGCGGCA ACCTGACCGG TGCTGCAATT GCGGTCATTG CCGCCATCGC CGGATTACTC CTCGCGCTGG TGCGCCGCCT GGCGCTACGC CGCCACAGCC ACGCCGCAGT GATGCTGTTC GCCATCACTC TCTTGCTGGG CGCAATAGCC AGTGTCTGGG TGGAACCGGC CAGTGCGCCG GTTGCTGTCC TTATTCCGCC GCTCATTCTG ATCACAACGG TGCAATATCT CGAACGCCGC AATGTTGGAC CCGTGATCTT TCTCATCAGT CTTGCCACTG TGGTCCTTGC CATTGGCAGC GAGGCGGCGC AACCGTGGTT TGCCACGCGC GAGCCGCTTG CGCCTGTCCT TCGCATCACC GCACTGGTTG GCGCCATACT TCTCCTGGCA GCGATCCTCT GGCGCTTCAG TTCGCGCCTT CACGCCACAC TGGTGCGTCT CGAAGCCGCT AATGCCGCTT TGCGCGAGAG TGAGGCGCGG TATCGTTCCG TTGTCGAAGA CCAGACCGAC CTGATCTGCC GCGCACAATC TGATGGCATG ATTACCCTGG TCAATGACGC CAGTTGTCGC TACTGGGGAT TGACACGCGA TGAAATCATC GGCAGCGATT TGCGGCGGTT CGTCCACCCC GATGATATTC CGCGCGTCAA TCATCACTTC GAATCGCTCA CCTCTGAGTC GCCGGTGGGA ACTATTGAAC TTCGAGTCAT TCCACCGGGC AGCGAGGTGC GCTGGCAGCG ATGGACCGTC CGCGCACTCT ACAATGGCGC ACGCCGCGTC GGGTACCAGT TGGTCGGGCG CGACATCACC GAGCGCAAAC GCATGGAAGA ACATTTGTTT CGCAGTGAGC GTCAGTTCAA AACCATTGCC GAAAACGCGC CCGACATTAT TTCGCGGTAC GATCTCCAGG GACGCTACCT GTACGTCAAT CCGGCGTTTG AACAGGCAAC CGGGATAACC GGTGCGGAAA TCATGGGCAA AACGCAGCGC GAACGCGGCG TGCCCGAACA TATTGCCCAA CTGTGGGACT CCCGTTTCCA GGCAGCCATC GAGACCCGAT CCGTTCAGAC GATCGAGTTT GATCTTCAAA TGCCATCGGG TCATCGTTTT TATGAGACGC GCATCGTGCC TGAACTTGGT CCTAATGGCA CTGTTGAGTC TTTGCTGGCG CTTTCGCGCG ATGTGACGGA GCGGCGCAAA AACGAACTTG TTCTGCAACA CCGTCAGAAA CTCGAAAGCA TGGGGGTTAT GGCGCAGGGC ATCGCCCATC AGTTCAACAA TCTGCTTGGT ATTATGCTGA ACAATGCCGA ACTGGCTCTC ACGACGCTTT CACCGCAGGC GCCGGAGCGG CTCTTGATCG AATCTATCGT CTGCGCCGGT CGACGCGCGG CGGTTATCAC GCGCCAGATG CTGACCTACG TAGGGCATAG CCCATTGCAG ACCACTCTCG TACACTTGAA CGACCTGATC GAAGAAATGG CAGCACTCTT GCAGGCATCG ATTCCAACCG GCGTCACGCT GGTCTATCGC CTGAGCGACC ACGATCTGTT GGTGGAAGGG GATGCCGCCC AACTCCGACA GGTCCTGCTC AATCTGACCA TCAATGCGGC AGAAGCCATC GAAGGCAGAC CCGGCGAAGT TGTGATTTCA ACCGATGCCC GCTTTGTTGA GCGCTCGTTC CTGGTGACAA CGATTGGAAC CCCTGATCTG ACCGACGGAA CGTATGCGGC GCTGTCTGTC AGCGACAATG GATGCGGCAT GGACGCTGCA ACCCTTGAAC GAATCTTTGA CCCTTTCTTC AGCACCAAAT TTATCGGTCG CGGTTTGGGG TTGCCTGCAA CGTTGGGCAT TGTGCGCGGA CATCACGGCG CCATCCACGT CGCCAGTGCG CCCGGTGAGG GAACGACCGT CACCGTCTTT CTGCCGATAG CGCATCAACC ATCCATCCGC ACCGGTTTGT CGCCTCAGAC CCGCACGGCG GCAAGTTCGG GCTATTCAAA AATCTTTCTG GTCGTCGATG ATGAAGAGAG TGTGCGCGCC GTTACGGCGC GCATGCTGGA GTGGATGGGA CATCCAGCGC TCACAACCGG CGATGTCGAG ACGGCGATCA TTCTCGCGCG ACAACATTGC GAACACCTGG CGTGCATCCT GCTCGACCTG ACGATGCCTG ATCGTGATCT CTATCAGACG GTCAGAGATT TCCGGCAGAC ATGCCCCGAT GCGCCGATCA TTCTGATGAG CGGGTATACC GAAGATATTG CCAGCCGACG TTTCTCGCAC CTTGCGTTGA ATGGCTTTCT GCAAAAACCG TTCACTTCAT ACGAACTCCA AGGCGCCATC GACTGTGCGC TGGCTGCAAT CTGA
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Protein sequence | MSVSEQSQDR LHEPSSLTTL ITLLLGFALI LAIVSTGICF ISGNLTGAAI AVIAAIAGLL LALVRRLALR RHSHAAVMLF AITLLLGAIA SVWVEPASAP VAVLIPPLIL ITTVQYLERR NVGPVIFLIS LATVVLAIGS EAAQPWFATR EPLAPVLRIT ALVGAILLLA AILWRFSSRL HATLVRLEAA NAALRESEAR YRSVVEDQTD LICRAQSDGM ITLVNDASCR YWGLTRDEII GSDLRRFVHP DDIPRVNHHF ESLTSESPVG TIELRVIPPG SEVRWQRWTV RALYNGARRV GYQLVGRDIT ERKRMEEHLF RSERQFKTIA ENAPDIISRY DLQGRYLYVN PAFEQATGIT GAEIMGKTQR ERGVPEHIAQ LWDSRFQAAI ETRSVQTIEF DLQMPSGHRF YETRIVPELG PNGTVESLLA LSRDVTERRK NELVLQHRQK LESMGVMAQG IAHQFNNLLG IMLNNAELAL TTLSPQAPER LLIESIVCAG RRAAVITRQM LTYVGHSPLQ TTLVHLNDLI EEMAALLQAS IPTGVTLVYR LSDHDLLVEG DAAQLRQVLL NLTINAAEAI EGRPGEVVIS TDARFVERSF LVTTIGTPDL TDGTYAALSV SDNGCGMDAA TLERIFDPFF STKFIGRGLG LPATLGIVRG HHGAIHVASA PGEGTTVTVF LPIAHQPSIR TGLSPQTRTA ASSGYSKIFL VVDDEESVRA VTARMLEWMG HPALTTGDVE TAIILARQHC EHLACILLDL TMPDRDLYQT VRDFRQTCPD APIILMSGYT EDIASRRFSH LALNGFLQKP FTSYELQGAI DCALAAI
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