| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2722 |
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| Symbol | |
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| ID | 5540208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3514300 |
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| End bp | 3515793 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894848 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001432811 |
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| Protein GI | 156742682 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.616494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTGCAT CGAGCCTTTC TCAACGCCTG ATGCGCCCGG CGCTCCTGCC GACCGCTGCG
GTCACGGCGC TGTGTCTGGT GTGCTTCTCT GCTGGTGTGC TGCCGGTCCC GCTTCGTCTT
GCTGCCCTGG CGCTCTTCGC GTTGCTAACA CTCGCGCAGC CGGTTGGCGG CCTCGTCAGT
GTGATACTCA CGGCGCCGCT CTACCTGATG CCAGCCTCTC TCGATGGCGC TGGTCGAACA
TGGCTTTTTC CGCTCCATGA AATCGCGCTC CTTATCACAA CCGCTATGGT GGCAGGTCGA
TGGACGATCC GGTGGCTCCA GAGAGGGAAT CTTTCCGCCC AACAGGCATG GGGGCGACGC
GCTCGCGCGA CAGGCGCCGC ATATGCACCG CATGCACTAC TGGCACTGGC AGGGATCATC
GGTGTGACGC TGGCGGTTCC CGAAGGGCGT GGCGCAGCGC TGCGTGAGTT TCGCTGGCTG
ATCGTCGAGC CGTTGCTCTT TTATGCGCTT GTGCGCGCGG TCGGCGTATC GCGCATGCTG
CTGGTTGGTG CGCTGGCGCT AAGCGGCGCG TGGGTGGCGA CCATTGGCGT GTTGCAGTTT
GTCGGGCTGG ATCTGACGCC GTTGATCGGC GAAAAACGCG CATTCAGTGA AAATATCATC
GCGGTAGATG GCGTGCGACG GGTGACATCG GTCTATGGAC ACCCAAACAA TCTGGGTCTC
TTTCTCGAAC GGGTCGGGTC CCTGGCTGCG GCGCTTGCGC TCGGCGTATG GAGCGGGCAG
CGCTTTTCAA CAACGTCCGG TGTACAAAGC GCAGAGCATC CATCGCGCCG TTCCGCAGCG
GCGCCCCTCT TCTTCGTCAT CTGCGCATCG CTTTCCCTGG CGGGAGTTAT CGTCTCGTTC
TCACGCGGCG CATGGCTGGG GAGCGCGGTT GCGGCAACGA TCATTGGTAT GGGTTGGTTT
CTCTTCCGGT CACGGGATCG TCAGGCATGG CGCTGGTCGG CGCTGGCACT CATCGGGGTG
GTGATCGCCG CAGTTATCGG GCTGGCGCTG ACGCTGCGCG GCGGTCCTGG CGGCGGGAGC
GTCGATGCGC GTCTGCTTCT CTGGCGCGAG TCGCTCGCCT ATCTTCAGCG CCATCCGCTT
GGTTTGGGAC TTGACCAGTT TTACTACTAT CACAACCCGG CATTCGGACG TAGCCTGATC
GATCCATCAC TCCTCGGCAC GAGCGAGGAG TATGCCGCTC ATCCCCACAA CCTGCTGCTC
GATGTCTGGA TCAATATCGG TCCACTCGGT GTGCTGGCAT TCGGATGGTT ACTCTTGCGC
TTCTATCGGA ACGCTCTCAG CGCCTTGCTC GACCGTTGCG ATCTGGTGGC GTTGGGCGCG
CTGGCGGCAA TGACCGCTGC GCTTGTCCAT GGGTTGGTTG ATCGCTTCTA TTTCGTGCCG
GACCTGGCGA TCGCGTTCTG GGCGCTGATA GCCGTGGCAG AACGCGAGCA TTGA
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| Protein sequence | MLASSLSQRL MRPALLPTAA VTALCLVCFS AGVLPVPLRL AALALFALLT LAQPVGGLVS
VILTAPLYLM PASLDGAGRT WLFPLHEIAL LITTAMVAGR WTIRWLQRGN LSAQQAWGRR
ARATGAAYAP HALLALAGII GVTLAVPEGR GAALREFRWL IVEPLLFYAL VRAVGVSRML
LVGALALSGA WVATIGVLQF VGLDLTPLIG EKRAFSENII AVDGVRRVTS VYGHPNNLGL
FLERVGSLAA ALALGVWSGQ RFSTTSGVQS AEHPSRRSAA APLFFVICAS LSLAGVIVSF
SRGAWLGSAV AATIIGMGWF LFRSRDRQAW RWSALALIGV VIAAVIGLAL TLRGGPGGGS
VDARLLLWRE SLAYLQRHPL GLGLDQFYYY HNPAFGRSLI DPSLLGTSEE YAAHPHNLLL
DVWINIGPLG VLAFGWLLLR FYRNALSALL DRCDLVALGA LAAMTAALVH GLVDRFYFVP
DLAIAFWALI AVAEREH
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