| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2718 |
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| Symbol | |
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| ID | 5540204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3507541 |
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| End bp | 3508731 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894844 |
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| Product | protein of unknown function UPF0052 and CofD |
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| Protein accession | YP_001432807 |
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| Protein GI | 156742678 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01826] conserved hypothetical protein, cofD-related |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCA TTGTGCAACG CCTCAGTTCG CTCCAGCGCC TGCTCCGTCC GTTGGCGCTG
ACGTTTGTTG GCATCGTTCT CCTGTCGCTT GGCGTTGCAT ACTTTTTTAT CTTCATGTAT
CGGACAGCGA CGCTGCCGCC GATCTTCTCG TTCATCACAC TCCAATTTAT GCCATTGTGG
GCACGCGGAT TGGTGTTCGC CGTCCTGGGA TTGATGGCGC TCGCGGTTGG CATCTGGCAG
CTCAGCGGCG TGGTGGTCAT CCCGCTCAAT ACGCAGGTCG ATACCAGTGG CGAACTGGTG
CTCGCCTATC AGCGTGACCA GACGCCTCCC CGGATGACGG TGCTTTCAGG AGGCGCCGGT
CTCCTGATCA CCGCCAGCCT TGGGCGATCG GTGCAACGGT TGACCTGTAT CACTCCAGTG
CAGGACCCGG TTGAGTATTA CTACCGGGCA TCGAGTCTGT TCAACTTCGA GAATGTCGTC
TTTGTCGTGC CAACTCCGGA ACCATACGAG GTCTTCGTTG AACTCGACGA TGGGCAGCGG
TTCAATGTCA AGCACAATAT TGCGCACGAT GAGCGACTGG CGGAGCGGCA TGTCGTCAAT
ATCTACATTG GCGATGAGCA GGGTCCGATC ATCACGCCAT TGCCGGTGAC CCAGGTGGCG
CTCGATGCCG TTGCGTCCGC CGATGTGATC GTCTTTGGTC CTGGCAGTCT CTATGAGAGC
ATTCTGCCCA ATCTGCTCAT TCCCGATCTG CGTGCTGCCA TCCGTCGCAG TAAGGCGTGC
AAAATCTACA TTTGCAGTTT GATGACGGAA CCCGGCATGA CAACCGGTTA TGGCGTCGGT
GATCATGTGC GTCAGATTGT GCGCTTTGGC GGATTTACTC CTGATTATGT GCTGGTGAAC
ACGCCGCGTA TCGACGCCGA GGTGCGCCGG ATTTATGCAG CCGCCGGACA GACGCCAGTT
CTTCTTACGC CTGAAGAGTA TGAAGAAACG GCCGTCAGCA CGACCGACCG GTTGACGACG
CGCGATATTC TCATCGAGGG CGCCAAAGTC ATCGAGGCGG ATCTGGCGAC GGCGGTGGTG
CAGTTGACAG CATCGCTCGA CCATCCCGGC GAAGGGCGCA CGGTGCGCGT GTTGCGCCAC
GACCCCGAGA AACTCGCAAC GGCGATTCTG GAGGTCTGGA AACGCAGATA A
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| Protein sequence | MQRIVQRLSS LQRLLRPLAL TFVGIVLLSL GVAYFFIFMY RTATLPPIFS FITLQFMPLW
ARGLVFAVLG LMALAVGIWQ LSGVVVIPLN TQVDTSGELV LAYQRDQTPP RMTVLSGGAG
LLITASLGRS VQRLTCITPV QDPVEYYYRA SSLFNFENVV FVVPTPEPYE VFVELDDGQR
FNVKHNIAHD ERLAERHVVN IYIGDEQGPI ITPLPVTQVA LDAVASADVI VFGPGSLYES
ILPNLLIPDL RAAIRRSKAC KIYICSLMTE PGMTTGYGVG DHVRQIVRFG GFTPDYVLVN
TPRIDAEVRR IYAAAGQTPV LLTPEEYEET AVSTTDRLTT RDILIEGAKV IEADLATAVV
QLTASLDHPG EGRTVRVLRH DPEKLATAIL EVWKRR
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