Gene Rcas_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2716 
Symbol 
ID5540202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3505039 
End bp3506013 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content52% 
IMG OID640894842 
Producthypothetical protein 
Protein accessionYP_001432805 
Protein GI156742676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACAA TCGAACCATG GTATTGGCAG GCGGTCGAAT CCATCAACTA CCCGTTTCCA 
CAACGTATGC ATCAAGCAGT ATCCTGGTTG GAAGATGAGA TAGTGACCTG GTGCTATGTT
CATAAACTTA TTCGAGATCA CGCACAAGAG CAACACCTGC GCTCGGCGCT CCTGGCAGAA
TTCATAGCAC GTGCCAATGC AGAGATTCCT CCCTCGATGT TACGTCTCAT TGGATTGTGG
ACAGTCTGGT TCTTCCTGCT CGATGATCTG ACGGATACAT TGCCTTCCGT CGAGGAGCTG
GCAGACTTAC AGATGCGTAT ACTTACTGTC GTCTCCGAAG GCAGAGCATA CGACTATGAT
CATCCGTTGA TACTTGCAGC AGCGGATCTT AGCGACTTGC TCAAGCAGTG TGCCGGATCG
GTCACGCTTG TTCGTTTCCT GCGAGCGCTT GCGCAAACCT TGGAAGCGCA TCTCTGGGAA
GTCTCTACAC GTCTTGCCGA TATTCAACCG GACAGTCAAA CGTATACAAA TATGCGCCTC
TGGTCTGGTG CATTTTTTCC AATGATCGCG CTCGCAGACA TGGCACAGGG TTCGGTATTA
CCCTCGCATA TCTTCGAGCA TGCCATCGTC CAGGAACTGA TCCGCGCTGC AACCCAGGCG
GTATTATGGT ACAACGATCT CTGGTCGTAT CCGAAAGAGA TACAGAAGCA CAAGATGCCA
CATAACATCG TGCACATTCT TGCGCATGAA AACCGTATAC CTCTGTCTGA GGCGCTATCT
CTCACCATCG CCCAGCACGA TCGGGCGATA CAGCAATTTT TGCGTCTCAA AAAGCAGATA
CACACCCTTA ATGGCGCCGA AGACGTCGTG CTGCGCTTCG TTGAGAGTAT TGAAGCCTGG
CTGCGCGCAA CACAGGACTG GTCGCACCGC ACCGACCGTT ACAGACAACA GATGGTCAGA
GCGATCCACC CCTGA
 
Protein sequence
MMTIEPWYWQ AVESINYPFP QRMHQAVSWL EDEIVTWCYV HKLIRDHAQE QHLRSALLAE 
FIARANAEIP PSMLRLIGLW TVWFFLLDDL TDTLPSVEEL ADLQMRILTV VSEGRAYDYD
HPLILAAADL SDLLKQCAGS VTLVRFLRAL AQTLEAHLWE VSTRLADIQP DSQTYTNMRL
WSGAFFPMIA LADMAQGSVL PSHIFEHAIV QELIRAATQA VLWYNDLWSY PKEIQKHKMP
HNIVHILAHE NRIPLSEALS LTIAQHDRAI QQFLRLKKQI HTLNGAEDVV LRFVESIEAW
LRATQDWSHR TDRYRQQMVR AIHP