| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2709 |
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| Symbol | |
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| ID | 5540195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3496571 |
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| End bp | 3498076 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640894835 |
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| Product | multidrug resistance efflux pump-like protein |
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| Protein accession | YP_001432798 |
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| Protein GI | 156742669 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.64951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGGT TTTCCATTAA GAACACCGCT GTGGCGGCGG CGCTGCTTAT GTTGACTGCC
TGCGGCGGGC AGGCGAACAC TGCTCAACCT ACCCCCATTC CGCCAGTGCG CGCCGATGAA
CGCGTGGTTG CCGAAGGGCG TGTCGTGCCG ATGCGCAGTG CTGCACTGGC AATGAACAGC
AATGGCGTCG TGGCGGAAGT GCTCGTAGCA GAAGGCGATA TAGTGCAGTC GCAACAGGCG
CTCCTCCGGC TCGATACCCG CCGCCAGGAG GCGCTGGTGG CGCAGGCGGA AGCCGACAAG
GCGCGCGCCG AGGCGGCGCT GGCGCGCCTG AAGGCGGGAT CGAGCGAAGA AGAACTGATG
GCTGCCGAAG CACAGGTTCG GCGTGCCGAA GCGCAGGTGC AGCAGGTGCG CGGCAGCGTG
ACCGATCGCG ACATCCTGGC TGCTGAAGCG CGTCTCCAGC AGGCGCACGC GCGGCTGGCG
GAACTCGAAC GCGCCGATGA TCGCCCTGAA GTCATTCAGG CAAAAGCGCG CCTCGACGAA
GCGCGCGCGA CGCTCGAAGC CGAAAAGGCG CGACTCTCGG CTGCCAAGAC CGATGCCCGC
CTGCGGATGG ACCAGGCGGT TGACGCGCTC ACACGTGCCC AGTCAGCCTG GGTGGTCGCC
AGGAGTGAGT GGGATGCCGT CCAGTCCGAT GGTCGGCACC CAACACTGGG GTACGGCTTG
AACGAAGCCG AGAAGCGCAA GTTCCTCGAT GCGTTCGTGC AGGCAGAAAC GGCGCTGCGC
AGCGCCGAGA GCAGTGTCGA GCAGGCGCGT GTGGCATACG ACGCGGCTCG CCAGGCAGAG
GCGGTCGGCG TCAGCGCCGC CGAGCAGCGC GTCATCGAAG CGCAGGCGGC ATACGACCGT
GTGCTGCGCA GTACGAACAA CGACGAACTC GCTGCAGCGC GCGCCGAAGT GGCCGATGCA
CAGGCGCGCC TCGACAAACT CCGTGGCGAA GAACGCAGCG GGGCGATTGC AGTCGCTGAG
GCTGCGCTGG CGGAAGCACA GGCAAATCTG GCGCGCCTGA AAGCCGGACC GACAACCGCT
CAGATCGCCG AGGCGGAAGC CGAGGTGCGT CGCGCTACTG CTGCGCTCCT TGCTGCGCGG
ACACAACTCG ACGAAATGAC CCTGCGCGCG CCGTTCGGTG GACTGGTTGC TGCGGTCAAT
ATTAAGCCTG GCGAATATGT GACTCCCGGC ACGGCGCTGA TCACCATCGG CGATCCATCA
GCATGGCAGA TCGAAACGAC CGACCTGACC GAACTGAGTA TCGTCAAGGT ACAGCCTGAT
GCGTTGGCAA CCATCACATT CGACGCACTG CCCGGCGTCG AAATGCAGGG GCGCGTGACG
CGCATCCGCG AACTTGGCGA GAACCGCCAG GGGGATATTA CCTATCGCGT GATCATTGCC
CCCAACCAGC ACGATACGCG CCTGCGCTGG AATATGACCG CCTCGGTCGC CATTGGTCAA
CCGTAG
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| Protein sequence | MFRFSIKNTA VAAALLMLTA CGGQANTAQP TPIPPVRADE RVVAEGRVVP MRSAALAMNS
NGVVAEVLVA EGDIVQSQQA LLRLDTRRQE ALVAQAEADK ARAEAALARL KAGSSEEELM
AAEAQVRRAE AQVQQVRGSV TDRDILAAEA RLQQAHARLA ELERADDRPE VIQAKARLDE
ARATLEAEKA RLSAAKTDAR LRMDQAVDAL TRAQSAWVVA RSEWDAVQSD GRHPTLGYGL
NEAEKRKFLD AFVQAETALR SAESSVEQAR VAYDAARQAE AVGVSAAEQR VIEAQAAYDR
VLRSTNNDEL AAARAEVADA QARLDKLRGE ERSGAIAVAE AALAEAQANL ARLKAGPTTA
QIAEAEAEVR RATAALLAAR TQLDEMTLRA PFGGLVAAVN IKPGEYVTPG TALITIGDPS
AWQIETTDLT ELSIVKVQPD ALATITFDAL PGVEMQGRVT RIRELGENRQ GDITYRVIIA
PNQHDTRLRW NMTASVAIGQ P
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