Gene Rcas_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2704 
Symbol 
ID5540186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3491963 
End bp3492673 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content60% 
IMG OID640894826 
Producthypothetical protein 
Protein accessionYP_001432793 
Protein GI156742664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTTT CTCGCTTACT CATCATTGGT GCGATAGCTG CAGGACTCGT CCTCGGCATC 
GCTATCGGTC CGCTCTTTTC CGCAGCACCG GTTCGTGCGC AGTCGTCACC AACGACGCCA
TCCGGTATTT CCAGGGCGTC GCTGTGGAAC GATTTCCTGG ACCAGCTTGC CGCTGCCTTG
AATATTCAAC GCGCTACGCT CGATAGCGCC ATTCAGTCGG CGGGCAGCAA AACTATCGAC
AATGCCGTGC AACAGGGGAC GCTGACGCAA GCGCAGGGCG ATGCGCTCAA GGCGCGCTTG
CAGTCGGGCG ACATCGGTGT GCTCTGGGGT CGTGGGCGTG GTAAAGGACC AGGTATGCAG
GCGCTGGTGA ATATTCGCCA GGCAATGCTC GATGCCGCTG CGCAGAAATT GGGGATGACC
ACGAGCGATC TGCTGACTCA ACTGCAAAAC GGACAAACGC TGGCGCAGAT TGCGCAGTCG
AAGGGAGTGG CTGAACAGGA TGTGATTAAT GCTGCTCTGG CGGCCGCCAA GACTCAACTG
GATCAGGCGG TTGCAAATGG GAGCCTGACC CAAGCGCAGG CGGATGCGGT CTATGCGAAC
CTTCAGCAGA AGGGTTCGTT GCTCTTTGCT CCGCGCGGTC GTGGTTTCCA CGGTCGTGGC
TGGTGGGGGG CGCCGGTAAC GCCGACGCCT TCCCCGTCGA GCACGACGTA A
 
Protein sequence
MNLSRLLIIG AIAAGLVLGI AIGPLFSAAP VRAQSSPTTP SGISRASLWN DFLDQLAAAL 
NIQRATLDSA IQSAGSKTID NAVQQGTLTQ AQGDALKARL QSGDIGVLWG RGRGKGPGMQ
ALVNIRQAML DAAAQKLGMT TSDLLTQLQN GQTLAQIAQS KGVAEQDVIN AALAAAKTQL
DQAVANGSLT QAQADAVYAN LQQKGSLLFA PRGRGFHGRG WWGAPVTPTP SPSSTT