| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2703 |
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| Symbol | |
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| ID | 5540185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3488597 |
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| End bp | 3491197 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640894825 |
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| Product | primosomal protein N' |
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| Protein accession | YP_001432792 |
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| Protein GI | 156742663 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTG AATTGCTTGC CGATGTCGCC GTGGGCGCCG ATGCGGTGTT CACCTACCGC
GTGCTGCCGC CGCTGCACTC CGTGATACAG GTCGGGCATC TGGTGTGGGC GCCGCTGCGC
CAGCGGCATG TGCAGGGTAT CGTTCTCGAA CTGTACACAT GGGGCGGCAG TCTGTACAAC
CCAGACGATC CCCTCAGTCC GCCGCGCCTC CGATCCGACT CGCTCAACCG GTCAAATGCG
CATCCTCCCA CATTGCGCGA CCTGATCGAT ATTGCCGATC CAGATGTGTC GTTGACGCCA
GCGCAGATCC GGCTGGCGCG CTGGATTTCC GAGTATTATC GGGTGTCGTT GTACGAAGCG
CTGAGCCTTA TGCTGCCGCC TGGCGTCACC CGTGAATCCG AAACCTCCTG GCGCGCAACG
GTGGAAGGGC ATAGCGCCAC GCTGGGCGCG TTGCCTCCTG GCGAGCGGGA CGTGCTCTAC
CTGTTGCGTC GCAGTGGCGA AATGACCGAA CGCGATCTTC GCAGGCGGCT CCGTGGCAGC
GATGCTGAAC TTCAGGCAAT CTACGCTGCC CTGCGCGAAC GCGGCCTCAT CGAGCGTGGT
ATGATCCTCA GCCGGGCGCG TGCGCGCCCC CGCATCGAAC GCCTGGTGCG CCTCGCTGTG
TCGCCAGATG AAGCGCGTGC TGCGCTGGAA ACTCTTGCGC GCGCACCCCG GCAACGCGCT
CTGGCGGCCT ATCTGATCGA CCACCCTGAG CCTGCACCGG CCTCCGAGGC GCTCGCTGCC
GCTGCCGCCG ATACCGGCGC ACTGCGCGCC CTCGAACGCC GGGGATTGGT CGAGGTGATA
GCGCATGAGG TGTGGCGCAA CCCGCTGATG CACATCAGCG CCTTGCCCGA TACGCCGCCA
GCGCTCAGCC CGGCGCAGCA AAAGGCGTGG GACGAGATTG CGCGCGTGAT TGATTGTCTG
AAGGGGTCTT CACCGAACGA TGATACTGAT GCCGTTCAGA GGCGCTTTCT GCTCTACGGC
GTCACCGGCA GCGGCAAAAC CGAACTCTAC CTGCGCGCCA TTGCACGGGT CTTGCGCCTG
GGTCGGCAGG CGCTCGTGCT GACTCCTGAA ATCGCCTTGA CGACCCAACT GGTGCGCCGC
TTCGCCGCCC GCTTCCCCGG TCGCCTGGCA GTGCTGCACA GTGAACTTGC AACTGGCGAA
CGGTATGATC AGTGGCGTCG GTTGCGCCGG GGAGATGCGA GCATCGCCAT TGGATCGCGC
TCTGCCGTCT TTGCGCCGCT TCCTGACCTG GGTTTAATCA TCGTTGATGA AGAACACGAG
CCGTCGTACA AACACGATGC CGCGCCGCGC TATCACGCGC GCGATGTGGC GCAGCGCCTT
GCAGCGATCA CCGGCAGCGT GCTCATTCTC GGCAGTGCCA CTCCATCGGT CGAGAGTTAC
GCTGCCTCAC GCACCGGTCA CCTGCGATTG CTAGAATTGC CGGATCGTGT TGCGATGGCC
ACCGGTCCTG ATGGATTGCC GTATACCCGC AGACTGCCCC TGCCACAGGT GATCGTTGTC
GATATGCGGC GGGAACTGGC GGAGAATAAC CGTTCGATTT TCAGCCGCGC GCTTCAGAAG
GCGCTGGCGG AAACGCTCGA ACGTGACGAA CAGGCGATAC TCTTTCTCAA CCGGCGCGGC
TCGGCATCGT TCTATATGTG CCGCGATTGC GGTCACGTTA TCACCTGCCC GAATTGTTCC
TCGCCGTTGA CGCTACACCA GGAGGCGTCC GGTCAGCCCA GCAGCGACCG ATCGGCATCG
CCAGGGCTAC TCGTCTGCCA CACCTGTAAC CATCGGGAGT TGCCGCCCGC TATCTGCCCA
CACTGCTGGA GTTCCCGCGT CAAATCGTTT GGCATCGGCA CGCAACGGGT GGTTGACGAG
ATCGCAACGC TCTTCCCTGA TGCGCGCGTA TTGCGCTGGG ATCGCGACAG TGTTGGGCGG
AAAGGGGACC ACGACCGCCT GCTCGATCAA TTTCTGCACC ACGAAGCAGA TGTGCTGGTC
GGCACACAGA TGATTGCTAA AGGTCTCGAT CTGCCGATGG TTGGACTGGT CGGCGTGGTT
GTCGCAGACA CTGGGCTGTA CCTGCCAGAT TTTCGCGCCG GTGAGCGCAC CTTCCAACTA
TTGACGCAGG TCGCCGGGCG GGCAGGGCGG CGCGCAGAAG GCGCAAAATC GATCATTCAG
ACCTACACGC CCGAACACTA CGCCATTCGC GCCGCGCAGG AGCATCATTA CCACGCCTTC
TACGAGGAGG AAATCGCCTT TCGCCGCCAG ACCGGCTATC CGCCGTTTAC TCGCCTGGTG
CGCTTCGTCT ATAGCGCTGG CAGCGACGTG CGCGCACGGC GCGCCGCCGA GTCGCTGGCA
GACGAGATTC GTGTACAGGC AACAAAGCGC CTCACGACCG ACTGGAGTCT CATTGGACCG
GCACCTGCCT TCTTCCACGT TCAACGCAAT CGCTACCGCT GGCACCTCAT CCTCCGGGCA
GTTGACCCGA CGCCGCTTCT CAACGCGCTG CTCCTGCCGC CGGGATGGGT GATCGATATC
GATCCCGTTC ATGTGTTGTA A
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| Protein sequence | MTAELLADVA VGADAVFTYR VLPPLHSVIQ VGHLVWAPLR QRHVQGIVLE LYTWGGSLYN
PDDPLSPPRL RSDSLNRSNA HPPTLRDLID IADPDVSLTP AQIRLARWIS EYYRVSLYEA
LSLMLPPGVT RESETSWRAT VEGHSATLGA LPPGERDVLY LLRRSGEMTE RDLRRRLRGS
DAELQAIYAA LRERGLIERG MILSRARARP RIERLVRLAV SPDEARAALE TLARAPRQRA
LAAYLIDHPE PAPASEALAA AAADTGALRA LERRGLVEVI AHEVWRNPLM HISALPDTPP
ALSPAQQKAW DEIARVIDCL KGSSPNDDTD AVQRRFLLYG VTGSGKTELY LRAIARVLRL
GRQALVLTPE IALTTQLVRR FAARFPGRLA VLHSELATGE RYDQWRRLRR GDASIAIGSR
SAVFAPLPDL GLIIVDEEHE PSYKHDAAPR YHARDVAQRL AAITGSVLIL GSATPSVESY
AASRTGHLRL LELPDRVAMA TGPDGLPYTR RLPLPQVIVV DMRRELAENN RSIFSRALQK
ALAETLERDE QAILFLNRRG SASFYMCRDC GHVITCPNCS SPLTLHQEAS GQPSSDRSAS
PGLLVCHTCN HRELPPAICP HCWSSRVKSF GIGTQRVVDE IATLFPDARV LRWDRDSVGR
KGDHDRLLDQ FLHHEADVLV GTQMIAKGLD LPMVGLVGVV VADTGLYLPD FRAGERTFQL
LTQVAGRAGR RAEGAKSIIQ TYTPEHYAIR AAQEHHYHAF YEEEIAFRRQ TGYPPFTRLV
RFVYSAGSDV RARRAAESLA DEIRVQATKR LTTDWSLIGP APAFFHVQRN RYRWHLILRA
VDPTPLLNAL LLPPGWVIDI DPVHVL
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