Gene Rcas_2702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2702 
Symbol 
ID5540184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3487946 
End bp3488458 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content59% 
IMG OID640894824 
Producthypothetical protein 
Protein accessionYP_001432791 
Protein GI156742662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATG ATCTCGCTCC GACGCTGACC GGTGAGTATA TCGAATTGCG GCCACTTGCT 
GAACGCGATC TGCCCCATCT GTTGAAGGTA TACCAGGGAA CGCCGCTCTA TTTTGACGGT
CTGGGAGACC GCGCGGATCG CCTGACGCTC GATGATGTGC GCACCCAATG GCAACGGGCG
CAAGAGTCGC TAGATCGAGT GCTATTTGGC GTGTATCATC CGGTCACCGG TCTGCTGATC
GGTGCGGCAG ACGTTCAGAT CGGTGCGCCA CGATCAGATA CAGCGGCGGT CTGGTTGCTG
ATCTGGGGTG GGTTTCAGCG TCAGGGGTAC GGGCAGGAGT GTCTGGCGCT TATCGAGTCC
TGGCTGATTC CGAAATATGT CACTACCCTG TGCGCGATTG CGACCCATAA TGAGGAGGGA
ATTTCCTTCC TCGAATTGCA GGGCTTTCGC CGGACGGACC TCCCCGCAGA ACCGCCGATC
GGTCGCGGCA AGGCGTTCTG GATGTGTTGG TGA
 
Protein sequence
MTDDLAPTLT GEYIELRPLA ERDLPHLLKV YQGTPLYFDG LGDRADRLTL DDVRTQWQRA 
QESLDRVLFG VYHPVTGLLI GAADVQIGAP RSDTAAVWLL IWGGFQRQGY GQECLALIES
WLIPKYVTTL CAIATHNEEG ISFLELQGFR RTDLPAEPPI GRGKAFWMCW