Gene Rcas_2699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2699 
Symbol 
ID5540181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp3484929 
End bp3485861 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content63% 
IMG OID640894821 
ProductABC transporter related 
Protein accessionYP_001432788 
Protein GI156742659 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACT ACGTGATTGA AACAACCGGT CTGCGCAAGG TCTACGGCGC GAAAGTCGCC 
GTCGCCGACC TGACACTCCA GGTGCCACGC GGCGAAGTCT TCGCCTTCCT GGGACCGAAC
GGCGCCGGGA AGAGCACAGC AGTCAAGATG CTCCTCGGAT TGGTGAAGCC AACAGAGGGC
GACGCGCGCG TGCTGGGCTT CGCCCCAGCC GATCCTCGCG CGATGGCGCG GATTGGTTTT
CTGCCAGAGC ACTTCCGCTT TCACGAATGG TTGCAGGCTC ATGAATTCCT CGATCTGCAC
GCCCGCCTGA GCAGCCTCCC CGCATCGGTG CGGCAGCGGC GCATTCTCGA GGTGCTGGCG
CTCGTTGGAT TGTCTGAGCA CGCGCAGCGT CCGCTTGCCA ATTTCTCCAA AGGCATGCTC
CAGCGCATCG GTCTGGCGCA GGCGCTTATT CACGAACCGG AACTGGTGTT TCTCGATGAG
CCGACGTCGG CGCTCGACCC ATTTGGGCGC ATGCTGGTGC GCAATATCAT TCGCGACCTG
CGCGCCCATG GCACGACAGT GTTCCTCAAC TCCCATCTGC TCGGCGAAGT CGAGTTGACG
TGTGATCGGG CGGCATTCAT CCGCGAAGGG CGTGTGCTAC GCACCCTGAG CCTGCACGAC
GCCGCAGCCG GCAGAGTACG GGTGACGCTG CGAGTCGCAG GCGCGTCGAA CGGGTTGCTG
ACATCTCTGG CGGCGCTCTG CGCCAACGGC AGCACACCGC AGGAAACGTC GCCAGGAATG
ATCGAACTGG AAGTCGCCGG TGAAGACACG CTGCCGCAGA TCGCAGAGCA TATCGTTGCG
AGTGGCGCAC GCCTCTATGC TCTCACACCA CAGCGCGTCT CCCTTGAACA ACTCTTTCTC
GAAATCGTCG GCGCCGACGA CAGTGGACAG TGA
 
Protein sequence
MPDYVIETTG LRKVYGAKVA VADLTLQVPR GEVFAFLGPN GAGKSTAVKM LLGLVKPTEG 
DARVLGFAPA DPRAMARIGF LPEHFRFHEW LQAHEFLDLH ARLSSLPASV RQRRILEVLA
LVGLSEHAQR PLANFSKGML QRIGLAQALI HEPELVFLDE PTSALDPFGR MLVRNIIRDL
RAHGTTVFLN SHLLGEVELT CDRAAFIREG RVLRTLSLHD AAAGRVRVTL RVAGASNGLL
TSLAALCANG STPQETSPGM IELEVAGEDT LPQIAEHIVA SGARLYALTP QRVSLEQLFL
EIVGADDSGQ