Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2696 |
Symbol | |
ID | 5540178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 3480715 |
End bp | 3482694 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640894818 |
Product | ABC transporter related |
Protein accession | YP_001432785 |
Protein GI | 156742656 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGATCA TCACCGTCAA CAATCTCACG AAATACTACG GCGCTGAACT GATCTTCCGC GATGTCGGAT TTCAGGTTGC GCGCGGCGAG AAAGTGGCAA TCGTCGGGGT CAACGGCGCC GGCAAGAGTA CCCTGCTGCG GATCATTGCC GGACAAGAGA TGCCAACCGT CGGGAGCGTC CACATGGCGC GCGGCGCACG CCTGGCGTAT CTGGCGCAAG AAGTGCGCTT CGACAGCCAG CGCACGTTGC TCGAAGAAAT GCACGCCTCG CTCGCGTATC TCAACACGCT GCGCGATGAA ATGACCGCTC TCGAAACCGC GCTCACGGAC TCAGCCCGCC CCGACCATGA TGACGTGATG GAACGTTACG GCGAGGCGCT CCACCGCTTC GAGCACGCTG GCGGCTACGA CATCGACCGG CGGATTGCCA TGATCCTCGA TGGTCTGGGA TTTACCACTG CGCAACGCCA CGAACCGGTG GCGCGTTTCA GCGGCGGGCA GAAGACGCGC ACCGCGCTCG CGGCTGCGCT CCTGTCCGAT CCCGACGTGC TGCTGCTCGA TGAGCCGACC AACCACCTCG ATCTGGCGGC GCTTGAATGG CTCGAACGTT TCCTGCGCGA CTGGGACGGC ACGCTGATTG TTGTGTCGCA CGACCGCTAC TTCCTTGATC GGGTGACAAC CCGCACACTC GATCTGGCGT TCAACCGTCT CGATGGCGAT TACCCTGCGC CCTACCAGCG TTATCTGGAA CTGAAAGCCG CGCGGCTCGA ATTGCAACTG AAACAGTATC GCGCGCAGCA GGAAGAAATC GCCCGAACCG AGGAGTTCAT CCGCCGTTTC AAAAACAGCC AGCTCAGCAA ACAGGCGCGC GGGCGCGAAC GACGCCTGGA GCGCCTGAAG ACAGGGTGGG AAGGCGGTTC GGGGCGTACC GAAGGGTTAG TTGCCCGACC AGAGCAACAG AAGAAACTCG CGTTCAAACT CGGTTCGAAC CTGCGCGGCG CCGACCTGGT GTTGAAGATC GAAGAGTTGA CGGTGGGGTA CGAGCGCCCT GCCGCCGTTG CACCGCAACC GGCGCTGCTC CACATCCCCG ACCTCGAAAT CTGGCGCGGG CAACGGGTGG CGCTGATGGG ACCGAACGGC TGCGGCAAGA CGACTCTGCT GCGCACGATT GTCGGCGACC TGCCGCCGCT GCGGGGGCGG GTGCGCCTGG GAAGCAATAT CAAACTCGTC TACTACGCTC AGGCGCACGA AGGGTTGCAG ATGGATCGGA CGATTCTCGA CGAAATTCGC CGTATTCGAC CGGAGATCAA AGAGACCGAA GCGCGCACCC TGCTGGGGCG CTTTCTCTTC AGTGGTGATG AGGTCTCCAA GCGCATCGCC AATCTTTCCG GCGGGGAACG CGGCAGGGTG GCGCTGGCGC AACTGATGCT GTTGGGCGGC AATTTTCTGG TGCTCGACGA ACCGACGAAC CATCTCGACA TCGATGCGCG CGAGGCGCTC GAGACGGTGC TGAATGAATA CGATGGCACG GTACTCTTCG TGTCGCACGA CCGCTACTTT GTCGATGCCG TCGCCGATAC GATCTGGATG GTGCGCGATG GCGTCATTGA GGTATTTGAT GGCGCATATT CCGACTATAG CGCCACGCGA GACGCTGCAC CCGCCACAAA CGCACGGCCG GCGAACAGTG TGCAGAAGCG TGAGACGGCG CGCGAGTCGC GTCCTGCTTC GTCTGCAAAC GATACACGGG CGTTTAATCG TGAGCCGGAG CGTGAAGAAC GTCGGCGGCA ACGTCGCCTG GCGGCGCTGG AAGAGGAAAT TGCCGGTCTC GAAGCGCAAC TCCGCGATCT CGCAGCAGCG CTGAACGCCG CCAGCGCCAC AGGTGACGTC CCGCGCGTAA CATCGCTGGG CATCGAGATG GTCGAAGTTC AGGCGACGCT GGACGCGCGG TACGATGAGT GGGCGACAAT AGCAGTTTAG
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Protein sequence | MSIITVNNLT KYYGAELIFR DVGFQVARGE KVAIVGVNGA GKSTLLRIIA GQEMPTVGSV HMARGARLAY LAQEVRFDSQ RTLLEEMHAS LAYLNTLRDE MTALETALTD SARPDHDDVM ERYGEALHRF EHAGGYDIDR RIAMILDGLG FTTAQRHEPV ARFSGGQKTR TALAAALLSD PDVLLLDEPT NHLDLAALEW LERFLRDWDG TLIVVSHDRY FLDRVTTRTL DLAFNRLDGD YPAPYQRYLE LKAARLELQL KQYRAQQEEI ARTEEFIRRF KNSQLSKQAR GRERRLERLK TGWEGGSGRT EGLVARPEQQ KKLAFKLGSN LRGADLVLKI EELTVGYERP AAVAPQPALL HIPDLEIWRG QRVALMGPNG CGKTTLLRTI VGDLPPLRGR VRLGSNIKLV YYAQAHEGLQ MDRTILDEIR RIRPEIKETE ARTLLGRFLF SGDEVSKRIA NLSGGERGRV ALAQLMLLGG NFLVLDEPTN HLDIDAREAL ETVLNEYDGT VLFVSHDRYF VDAVADTIWM VRDGVIEVFD GAYSDYSATR DAAPATNARP ANSVQKRETA RESRPASSAN DTRAFNREPE REERRRQRRL AALEEEIAGL EAQLRDLAAA LNAASATGDV PRVTSLGIEM VEVQATLDAR YDEWATIAV
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