| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2690 |
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| Symbol | |
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| ID | 5540172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3473526 |
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| End bp | 3475928 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640894812 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001432779 |
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| Protein GI | 156742650 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGCC TATGCTGCAC GCTGGCGCTG GCAGTGTCGC TGGTTGCCTG TGCGCCGGAA
GCCCCCATAC CTGCGCTGGA AACGTCGATC CCGACGCCGC TCGCGTCAGA GGTGGCGACA
CCCGATGGTA CACGTTCCTC TGAGACGTCG GCGCCTGATG CCACGGTGTT CCCCGCCGCT
TCTCCCAATG ACCTGCTTGC GCGCGGATTG GAGCGGCGCG CTGCCGGTGA TTACGACGCG
GCTGCCCAGG CATTCTTCGC TGCCATGAAC GCTGCGCCGG GGACGCCGGT CGGGAGGGAG
GCGCGCTTTT ACCTGGCGGA AAGTTTTGCC CTCCGTGAAC GTTGGACATC GGCGTTCGAG
GCATTCACTG CCTTCGTTGC CGATGGCGTG CAGGATACGT TGACGACGCG GGCATGGTTC
TGGATCGCGC GCAGTCACGA GGAGGCTGGT TCGCACGCAG CGGCGGTTGC AGCGTATGCG
CAGTACCGCG CCTTCGATCC CCCCGCAGCG CCATATGCGC GAATGCGTCA GGCAGCGCAG
GAAGGGGCGC TCGGTCGTCT TGAGGATGCC GCAGCGGGGT ACGAGACGGT TGCGCGGAGC
GCGATTGCAC GCGGGCAGCG CGCTGCGGCG TATGAGGCAG CGATCCGCGC GCGCCGCTCC
CTGGGGCAGA ACGATGCGGC GTTGCAACTG GCCGCCGAAC TGTTGGCGCT GGCACAGCGG
CCGGAGTACC GCGCGCGCCT GTTGATCGAA CTTGCCGATC TGCCCCGCTC CCAGGGAGAT
GTGGCAACGG CGCGCACGTG GTTGGTCGAG GGTCTCGAAC GTGCGCCGGG GTTGCCGGCG
GCGCTGGCGG CAGTGGATCG ACTCCGCGCC GATCCTGAGA TTGCCCTTCC GCCTGAGTTG
GTCGCGCGCG TCTACGAAGC GCACGGACGC TGGTCCGACG CGCTGGCTGC GCTCGATGCG
GCGCTTGCCG GCGCCGATGC GACACAGCGC GCCGATCTGC TGCGACGACG GGCGCTGGCG
CTGCGGGAAC TGGGAAACTT TACGGCGGCG CTGGAAGGGT TCGACGCTGC AATTGCCGCC
GCTGGCGAAA GCGACGCCGG TGTGCAGGCG CGCCTCGACC GGATTCAGAC CGTCGGGCAG
AGTGGCGCCA CTGAGTCTGC TATTCAGGGG TATCGTGATT TTGCGGCAGC GTGGCCGGAC
GACCCGCGCG CGCCGGAGGC GCTGCGTCGC GCAGCGCTGT TGCTCGACCG GCTTGGCAAT
GCGGATGCTG CGGCACAGCA GCGTATCGAC CTGGGACGAC GCTACCCGGC GTTGCCGCTG
GCGCAAGAAG CCTGGTTCGC CGGAGGGTTG CATCTGTTCG TGTCGGGACA AACGGTGCAA
GCGCGGCAGG TATGGGAAGA ACTGGCATCT GCCACGTCGG GGAGTGTGGC GCTGCGCGCG
CGCTACTGGG CAGCGCGCGC GGCGCTTGCC ACCGGCGACA CGGATGCGGG TCGCGCGGCG
CTGGAACAGA TCATTATCGC AGCGCCAGAT TCCTATCCCG CCGCGCGCGC GCGCGCCCTC
CTCAACCGCC AGGAAACTGG CGCGCTACCG CTCGATGCGC CGATCAGCGC CGACGACTGG
CGCGCCGTCG AGGAGTGGCT TGCCACATGG GCTGGCGCGC CGCCGCCGGA CGTGCCGGAC
CCGGCGGGCG ATCCTGCTGT GCAGCGCGCG CTCGAACTCG ACGCGCTTAA CCTGCGGGTC
GAAGCAATGG CGGAATGGTC GGTTGCCCTT GCCGCGCGCG ACGACGACCC CTACGCGCTC
TATCTGCTGG GGCGCTATGC CCACGACCAC GGCGCTGCCA GCGTGGCGCT GCGCGCGGCT
AATCGCCTGG TGCGCCTGGC GCCCGGCGGT GATTCGGCGA GTGCGCCTCT GGCGCTCCGG
CGGCTCCTCT ACCCCGTGCC GTTCACGCCG GTCGTGCTGG CGCGCGCGCG TGAGTTCAGC
GTCGATCCGG CGTTCATGTT CGCGCTGTTG CGCCAGGAGA GCGCCTTCGA CCCGGCGGCA
ACCTCATGGG CTGGAGCGCG CGGGCTGGCG CAGGTGATGC CTGCTACCGG TCAGGGGATC
GCGCAGGCAT TGGGGGTATC CGGCTTCCGC GAAGTAGACC TCTACCGGCC CGATCTCAGC
GTGCGGTTTG GCGCGTTCTA TATCAGCCGC CAGATCACAG CGATGAACGG GAGCCTGGAG
GGGGCGCTCG CGGCATACAA CGGCGGACCC GGCAACGCGC GGCGCTGGTC GGGGGGCGCG
CCGATCATCG ACCCGGACCT CTTCGCCGAG CGGATCGACT TTTTCGAGAC CAGAAATTAT
GTCAAATCTG TGATTGCCCA GTACGACGTG TACCGGCGGC TCTACCGCTG GAGCGGGGAA
TGA
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| Protein sequence | MHRLCCTLAL AVSLVACAPE APIPALETSI PTPLASEVAT PDGTRSSETS APDATVFPAA
SPNDLLARGL ERRAAGDYDA AAQAFFAAMN AAPGTPVGRE ARFYLAESFA LRERWTSAFE
AFTAFVADGV QDTLTTRAWF WIARSHEEAG SHAAAVAAYA QYRAFDPPAA PYARMRQAAQ
EGALGRLEDA AAGYETVARS AIARGQRAAA YEAAIRARRS LGQNDAALQL AAELLALAQR
PEYRARLLIE LADLPRSQGD VATARTWLVE GLERAPGLPA ALAAVDRLRA DPEIALPPEL
VARVYEAHGR WSDALAALDA ALAGADATQR ADLLRRRALA LRELGNFTAA LEGFDAAIAA
AGESDAGVQA RLDRIQTVGQ SGATESAIQG YRDFAAAWPD DPRAPEALRR AALLLDRLGN
ADAAAQQRID LGRRYPALPL AQEAWFAGGL HLFVSGQTVQ ARQVWEELAS ATSGSVALRA
RYWAARAALA TGDTDAGRAA LEQIIIAAPD SYPAARARAL LNRQETGALP LDAPISADDW
RAVEEWLATW AGAPPPDVPD PAGDPAVQRA LELDALNLRV EAMAEWSVAL AARDDDPYAL
YLLGRYAHDH GAASVALRAA NRLVRLAPGG DSASAPLALR RLLYPVPFTP VVLARAREFS
VDPAFMFALL RQESAFDPAA TSWAGARGLA QVMPATGQGI AQALGVSGFR EVDLYRPDLS
VRFGAFYISR QITAMNGSLE GALAAYNGGP GNARRWSGGA PIIDPDLFAE RIDFFETRNY
VKSVIAQYDV YRRLYRWSGE
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